Gene Information

Name : M062_20630 (M062_20630)
Accession : YP_008134533.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : RNA polymerase sigma factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4434297 - 4434806 bp
Length : 510 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :

GTGTCGAGCGCCGACCTCGCCCATGCGGCCGCGTTGCATACCCTCTACAGCGACCACCACCACTGGCTCACGGGCTGGCT
GCGGCGCCGCCTCGGCTGCCCGCAGAACGCCGCCGACCTGGCCCAGGACACCTTCGTCAAGGTCCTGGTTTCGCGCCAGG
CCGCGCGCATCGACGAACCGCGCGCCTTCCTCACCACCATCGCCCGCCGCGTGCTGTGCAACCACTACCGCCGCCAGGAC
GTCGAGCGCGCCTACCTGGAAGCCCTGGCCAGCCTGCCCGAGCGGGAAGTCCCCAGCGAAGAGACCCGCGCCATCGTCCT
GGAGACCCTGGTCGAGCTGGACCGTCTGCTCGACGGTCTGCCACCGCTGGCCAAGGAGACCTTCCTGCTGGCCCAACTCG
ACGGCCTGGGCTACGCCGAGATCGCCACGCAGCTGGCCATCTCCCTGAGCAGCGTCAAGCGCTACATGCTCAAGGCTGCG
CAACGCTGCTACTTCGCCGAGCTGCCATGA

Protein sequence :

MSSADLAHAAALHTLYSDHHHWLTGWLRRRLGCPQNAADLAQDTFVKVLVSRQAARIDEPRAFLTTIARRVLCNHYRRQD
VERAYLEALASLPEREVPSEETRAIVLETLVELDRLLDGLPPLAKETFLLAQLDGLGYAEIATQLAISLSSVKRYMLKAA
QRCYFAELP

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	AAL08458.1	FecI	Virulence	SRL	Protein	2e-36	52

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
M062_20630	YP_008134533.1	RNA polymerase sigma factor	VFG1049	Protein	7e-37	52