Gene Information

Name : M062_00435 (M062_00435)
Accession : YP_008130553.1
Strain : Pseudomonas aeruginosa RP73
Genome accession: NC_021577
Putative virulence/resistance : Virulence
Product : EvpB family type VI secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 102812 - 104308 bp
Length : 1497 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGGCCGAATTGAGCACCGAGAACCTGGCCCAGGGCCAGACCACCACCGAGCAGACCAGTGAGTTCGCCAGTCTGCTGCT
GCAGGAGTTCAAGCCCAAGACCGAGCGCGCCCGCGAAGCGGTGGAGACCGCCGTGCGGACCCTCGCCGAGCATGCCCTGG
AGCAGACCAGCCTGATCTCCAACGACGCGATCAAGTCGATCGAGTCGATCATCGCGGCGATCGACGCCAAGCTCACCGCG
CAGGTCAACCTGATCATGCACCACGCCGACTTCCAGCAACTGGAAAGCGCCTGGCGCGGCCTGCACTACCTGGTCAACAA
CACCGAGACCGACGAGCAACTGAAGATCCGCGTGCTGAACATCTCCAAGCCGGAGCTGCACAAGACCCTGAAGAAATTCA
AGGGCACCACCTGGGACCAGAGCCCGATCTTCAAGAAGCTCTACGAAGAGGAATACGGCCAGTTCGGCGGCGAGCCCTAT
GGCTGCCTGGTCGGCGACTACTACTTCGACCAGTCGCCGCCGGACGTCGAGCTGCTCGGCGAGATGGCGAAGATCTCCGC
CGCCATGCACGCGCCGTTCATTTCCGCCGCCTCGCCGACGGTGATGGGCATGGGTTCCTGGCAGGAACTGTCCAACCCGC
GCGACCTGACCAAGATCTTCACCACCCCGGAATACGCCGGCTGGCGTTCGCTGCGCGAGTCCGAGGACTCCCGCTACATC
GGCCTGACCATGCCGCGCTTCCTGGCGCGCCTGCCCTACGGGGCGAAGACCGATCCGGTGGAAGAGTTCGCCTTCGAGGA
AGAAACCGACGGCGCCGACAGCAGCAAGTACGCCTGGGCCAACTCGGCCTACGCGATGGCGGTCAACATCAACCGCTCCT
TCAAGCTCTACGGCTGGTGCTCGCGGATCCGCGGCGTCGAGTCCGGCGGCGAGGTGCAGGGCCTGCCGGCGCACACCTTC
CCCACCGACGACGGCGGCGTGGACATGAAGTGCCCGACCGAGATCGCCATTTCCGACCGCCGCGAGGCGGAGCTGGCGAA
GAACGGCTTCATGCCGCTGCTGCACAAGAAGAACACCGACTTCGCCGCCTTCATCGGCGCGCAGTCGCTGCAGAAACCCG
CCGAGTACGACGATCCGGACGCCACCGCCAACGCCAACCTGGCGGCGCGCCTGCCCTACCTGTTCGCCACCTGCCGCTTC
GCCCATTACCTGAAGTGCATCGTTCGCGACAAGATCGGTTCCTTCAAGGAGAAGGACGAGATGCAGCGCTGGCTGCAGGA
CTGGATCCTCAACTACGTCGACGGCGACCCGGCCCACTCCACCGAGACCACCAAGGCCCAGCACCCGCTGGCGGCGGCCG
AAGTGGTGGTGGAGGAAGTCGAAGGCAATCCGGGTTACTACAACTCGAAGTTCTTCCTTCGCCCGCACTACCAGCTCGAG
GGACTGACGGTATCGCTACGCCTGGTATCCAAGCTGCCTTCGGCCAAAGAGGCCTGA

Protein sequence :
MAELSTENLAQGQTTTEQTSEFASLLLQEFKPKTERAREAVETAVRTLAEHALEQTSLISNDAIKSIESIIAAIDAKLTA
QVNLIMHHADFQQLESAWRGLHYLVNNTETDEQLKIRVLNISKPELHKTLKKFKGTTWDQSPIFKKLYEEEYGQFGGEPY
GCLVGDYYFDQSPPDVELLGEMAKISAAMHAPFISAASPTVMGMGSWQELSNPRDLTKIFTTPEYAGWRSLRESEDSRYI
GLTMPRFLARLPYGAKTDPVEEFAFEEETDGADSSKYAWANSAYAMAVNINRSFKLYGWCSRIRGVESGGEVQGLPAHTF
PTDDGGVDMKCPTEIAISDRREAELAKNGFMPLLHKKNTDFAAFIGAQSLQKPAEYDDPDATANANLAARLPYLFATCRF
AHYLKCIVRDKIGSFKEKDEMQRWLQDWILNYVDGDPAHSTETTKAQHPLAAAEVVVEEVEGNPGYYNSKFFLRPHYQLE
GLTVSLRLVSKLPSAKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-79 41
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 1e-79 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M062_00435 YP_008130553.1 EvpB family type VI secretion protein VFG2070 Protein 0.0 99
M062_00435 YP_008130553.1 EvpB family type VI secretion protein VFG2093 Protein 4e-84 43
M062_00435 YP_008130553.1 EvpB family type VI secretion protein VFG2475 Protein 2e-83 43