Gene Information

Name : ybiS (SOD_c04680)
Accession : YP_008136684.1
Strain : Serratia odorifera 4Rx13
Genome accession: NC_021591
Putative virulence/resistance : Unknown
Product : putative L,D-transpeptidase YbiS
Function : -
COG functional category : -
COG ID : -
EC number : 2.-.-.-
Position : 511518 - 512438 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATGAACATTCGCGCGTTATTAACCCTGTGTACGGCGCTGGTTGCATTCAGCCAGTCTGCCTTCGCCGTCGTATA
CCCTTTGCCTGCCAAAGACAGCCGTCTGGTCGGTGAAAACATCCAAATCACCGTACCCGAAGACAGCAAGCTGCCGCTGG
AGAGCTTTGCCGCTCAATACCAGATGGGCCTGAGCAATATGCTGGAAGCCAACCCGGGCGTGGATCCGTTCCTGCCGAAA
GCGGGCAGCACCATGACCATCCCGCAGCAGTTGATCCTGCCGGACGCACCGCGTGAAGGCATCATCATCAACAGCGCCGA
GATGCGTCTGTACTACTACCCGAAAGGCAGCAACACCGTGGTCGTGCTGCCAATCGGTATCGGCCAGTTGGGTAAAGACA
CCCCGCTGAACTGGATTACCTCGGTACAGCGCAAAAAAGACGGCCCAACCTGGACGCCAACCGCCAAGATGCGTGAAGAA
TACGCGGCAGACGGCGAGATCCTGCCAGCGGTGTTCCCGGCCGGTCCGGACAACCCGATGGGCCTGTATGCGCTGTACGT
TGGCCGCCTGTATGCGATCCACGGCACCAACGCCAACTTCGGTATCGGCCTGCGCGTGAGCCACGGCTGTGTGCGTCTGC
GTGCTGACGACATCAAGTACCTGTTCGACAACGTGCCGGTCGGCACCCGCGTGCAGTTTATCAACGAGCCGGTGAAAGCC
ACCGTCGAGCCGGACGGCTCCCGTTACGTGGAAGTGCATAACCCACTTTCCGCTAACGAAGAAGAGCTGAAGTCCAAAGA
TCCGGTGCCGTTAACCATTTCTGCGCCAGTGGGCAAAGTGGTGATGGATCCTGCCGTTAACCAGAGCGAAGTGGACGCGG
CGATCAAAGCCCGTTCCGGTATGCCGGTTAAAGTGAACTGA

Protein sequence :
MKMNIRALLTLCTALVAFSQSAFAVVYPLPAKDSRLVGENIQITVPEDSKLPLESFAAQYQMGLSNMLEANPGVDPFLPK
AGSTMTIPQQLILPDAPREGIIINSAEMRLYYYPKGSNTVVVLPIGIGQLGKDTPLNWITSVQRKKDGPTWTPTAKMREE
YAADGEILPAVFPAGPDNPMGLYALYVGRLYAIHGTNANFGIGLRVSHGCVRLRADDIKYLFDNVPVGTRVQFINEPVKA
TVEPDGSRYVEVHNPLSANEEELKSKDPVPLTISAPVGKVVMDPAVNQSEVDAAIKARSGMPVKVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
erfK YP_853091.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 7e-93 63