Gene Information

Name : M621_04085 (M621_04085)
Accession : YP_008157657.1
Strain : Serratia plymuthica S13
Genome accession: NC_021659
Putative virulence/resistance : Virulence
Product : protein disaggregation chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 880511 - 883084 bp
Length : 2574 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGCGTCTGGATCGTCTTACCAACAAATTCCAGCTTGCCCTCGCCGATGCCCAATCCTTAGCCCTTGGGCACGACAACCA
GTTTATGGAACCGTTACATCTGATGAGCGCACTGCTCACTCAGGAAGGGGGCACGGTTCGTCCATTATTAACTTCAGCCG
GTATCGATAGCGGGCGCGTGCGCACCGAAATCGAACAGGCATTGTCTCGTCTGCCTCAGGTTGAAGGCACCGGTGGCGAC
GTTCAACCGTCCCATGAGTTGGTGCGCGTTCTGAACCTGTGCGACAAGCTGGCGCAAAAGCGGGCGGACAAATTCATTTC
TTCCGAACTGTTCGTCCTGGCGGTGCTTGAAGATCGCGGAACTTTGACCGATCTGCTGAAAGCCGCCGGAGCAACAGCCG
ATAAAATCAGTAAGGCCATTGAGCAAATGCGGGGTGGTGACAGCGTGGAAGATCAGGGTGCTGAAGATCAGCGTCAGGCG
TTGAAGAAATACACTATCGATCTGACCGAGCGCGCCGAACAGGGCAAGCTTGACCCGGTTATCGGCCGTGACGAAGAGAT
CCGCCGTACCATTCAGGTGTTGCAACGTCGTACCAAGAATAACCCAGTGCTGATCGGTGAGCCTGGCGTGGGTAAAACTG
CGATTGTCGAAGGTCTGGCGCAGCGCATCATTAATGGTGAAGTGCCGGAAGGCCTGAAGCACAAACGCGTGTTGTCCCTC
GACATGGGGGCGTTGATCGCCGGGGCTAAATACCGCGGTGAATTTGAAGAGCGACTGAAAGGCGTACTGAGCGATCTGTC
AAAACAGGAAGGCAGCGTCATTCTGTTTATCGATGAATTGCACACTATGGTCGGCGCGGGCAAGGCCGATGGCGCAATGG
ATGCCGGCAACATGCTTAAACCTGCGTTGGCGCGCGGGGAACTTCACTGCGTTGGCGCGACCACGTTGAACGAATACCGT
CAGTATATAGAGAAGGATGCGGCGCTTGAACGTCGTTTCCAGAAAGTCTATGTGGCTGAGCCGAGCGTCGAAGATACCAT
TGCTATTCTGCGTGGTTTGAAGGAGCGTTATGAGCTGCACCACCATGTGCAGATCACCGACCCGGCGATAGTTGCTGCGG
CCACGCTGTCGCACCGCTATATCTCCGATCGTCAGTTGCCGGATAAGGCTATCGATCTGATCGATGAGGCTGCGTCAAGT
ATCCGTATGCAGATGGACTCCAAACCGGAATCGCTCGACAGGTTGGAACGCCGCATTATTCAGCTCAAACTGGAACAGCA
GGCGCTGAACAAAGAGTCGGACGACGCCAGTAAGAAACGCCTGGAAATGCTCAGCAGCGAGCTGGAGCAGAAAGAGCGCG
AATATTCAGAATTGGAAGAAGAGTGGAAAGCCGAGAAAGCTTCGCTCTCCGGCACCCAGAATATAAAGGCGGAACTGGAG
CAGGCCAAGATCACTCTGGAGCAGGCGCGTCGCGTCGGCGATCTGGGGCGCATGTCCGAACTGCAGTATGGCAAGATCCC
TGAGTTGGAAAAACAGCTCGCCGCCGCTACGCAGGCCGAAGGCAAAACCATGAAGCTGCTGCGCAACCGGGTGACTGACG
CGGAAATCGCTGAAGTGCTGGCGCGCGCCACCGGTATTCCGGTAGCCAGAATGTTGGAGGGCGAGCGTGACAAACTGCTG
CGTCTGGAGCAGGAGCTGCATTCCCGGGTGATTGGCCAGGATGAGGCGGTCACTGCGGTATCCAATGCAATCCGCCGCAG
CCGTGCGGGATTGTCCGACCCTAACCGGCCGATAGGCTCGTTCCTGTTCCTTGGCCCTACCGGGGTGGGTAAAACCGAGC
TGTGCAAAGCGCTGGCGTCGTTCCTGTTCGACAGTGACGATGCGATGGTGCGTATCGATATGTCCGAGTTTATGGAGAAA
CATTCGGTATCGCGGCTGGTGGGCGCACCTCCGGGCTACGTTGGTTATGAAGAGGGCGGTTATCTGACCGAAGCCGTACG
TCGTCGACCTTATTCGGTGATCCTGCTGGATGAAGTGGAGAAAGCGCACCCGGATGTGTTCAACATCCTGCTGCAGGTAT
TGGATGACGGGCGTCTGACCGATGGTCAGGGCCGTACCGTTGATTTCCGCAATACCGTGGTGATCATGACCTCTAACCTT
GGGTCTGATCTGATACAGGAACACTTTGGTCAGATGAACTATGCGCAGATGAAAGAATCGGTTATGGAAATGGTTACTCA
TCATTTCCGTCCGGAATTCATCAACCGTATAGATGAGGTGGTAGTGTTCCATCCGCTTGGCCAGAAGCATATTGCCGAGA
TTGCCAAGATTCAGCTGGCGCGTCTGTACAAACGTCTTGAGGAGCGTGGTTACGAAGTCACCATGACCGAACCGGCATTG
GCACTGTTGGGCCAAACCGGCTACGACCCTGTTTATGGCGCGCGTCCGTTGAAACGCGCTATCCAGCAGGAAATCGAGAA
CCCGTTGGCGCAGCAAATTCTTTCCGGCAAGCTGATCCCAGGCAAACTGGTTACGCTGGATGTGGAAAACGAGCATATCG
TGGCCAGGCAATAA

Protein sequence :
MRLDRLTNKFQLALADAQSLALGHDNQFMEPLHLMSALLTQEGGTVRPLLTSAGIDSGRVRTEIEQALSRLPQVEGTGGD
VQPSHELVRVLNLCDKLAQKRADKFISSELFVLAVLEDRGTLTDLLKAAGATADKISKAIEQMRGGDSVEDQGAEDQRQA
LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSL
DMGALIAGAKYRGEFEERLKGVLSDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYR
QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS
IRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKRLEMLSSELEQKEREYSELEEEWKAEKASLSGTQNIKAELE
QAKITLEQARRVGDLGRMSELQYGKIPELEKQLAAATQAEGKTMKLLRNRVTDAEIAEVLARATGIPVARMLEGERDKLL
RLEQELHSRVIGQDEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALASFLFDSDDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQEHFGQMNYAQMKESVMEMVTHHFRPEFINRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVTMTEPAL
ALLGQTGYDPVYGARPLKRAIQQEIENPLAQQILSGKLIPGKLVTLDVENEHIVARQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-103 42
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-99 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-99 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M621_04085 YP_008157657.1 protein disaggregation chaperone VFG0079 Protein 3e-145 45