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Name : secD (M621_04970) Accession : YP_008157827.1 Strain : Serratia plymuthica S13 Genome accession: NC_021659 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1061499 - 1063313 bp Length : 1815 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTGATCGTGGTGATCATCGTCGGTCTGCTTTATGCGCTTCCCAACCTCTATGGTGAGGATCCGGCTGTACAAATCAC TGGCGCGCGCGGTGTCGCCGCCAGTGAAACTACGCTGGACCAAGTCCGTACCGTATTAGAAAAAGACAATATCGCGAGCA AGTCGATTGCGCTGGAAAATGGCGCCATCCTGGCTCGCTTTAAAGATCCTGACGTTCAGTTGCGTGCCCGTGAAGCCTTG ATGGCGGAGCTGGGCGACAAGTTCGTCGTCGCGCTGAACCTGGCTCCGGCCACGCCGGCCTGGTTGGCCATGTTGGGCGC CGAGCCGATGAAGCTGGGCCTGGACCTGCGTGGTGGCGTGCACTTCCTGATGGAAGTGGACATGGACACCGCGCTGGGCA AGCTGCAGGAACAAACCATGGATACCCTGCGCAGCGAATTGCGTGAAAAGGGCATTCCTTATGCGTCTATCCGCAAGCTG GACAACAACGGCGTGGAAGTTCGCTTCCGTGACGATGCCGCTCGCGATCAGGCCATCAGCTACATTACCCCGCGTCAGCG CGATCTGGTGCTTTCCGCCAATGGCACCAATACCCTGAAAGCCAGCCTGACGGATGCTCGTCTGAGCGAAGCGCGCGAAT ATGCGGTGCAGCAGAACATCACTATCCTGCGTAACCGCGTCAACCAGCTCGGCGTTGCCGAACCGCTGGTGCAGCGCCAG GGCTCCGACCGTATCGTGGTTGAATTGCCGGGTATCCAGGACACCGCACGCGCCAAAGAGATTCTGGGCGCTACCGCTAC GCTGGAATTTCGTCTGGTCAACACCAACGCGGATGCGACAGCCGCGGCCAACGGCCGTGTACCGGGTGATTCCGAGGTGA AAAACACGCGCGAAGGCCAGCCGGTAGTGCTGTATAAGCGTGTGATCCTGACCGGTGACCACATCACCGACTCCACCTCC AGCACCGACGAATACAACCAGCCGCAGGTTAATATCTCGCTCGACAGCGCCGGTGGCACGTCAATGTCCAACTTCACCAA GGATAACATCGGCAAACCGATGGCGACCCTGTTCGTGGAGTATAAGGACAGCGGCAAGAAAGACGCCAACGGCCGTGCGA TTCTGGTGAAGCAGGAAGAAGTGATCAACGTGGCGAACATTCAGTCACGCTTGGGCAACAGCTTCCGTATCACCGGTATC GGCAACCCGAACGAAGCACGTCAGCTCTCGCTGCTGCTGCGCGCCGGTGCGCTGATTGCACCTATCCAGATCGTGGAAGA ACGTACTATCGGCCCAACCCTGGGGCAACAGAACATTACCCAAGGTCTGGAAGCCTGTCTGTGGGGCCTGGTGGCTTCCA TCGTGTTCATGGTGGTTTGGTACCGTAAGTTCGGCATGATCGCCACGACGGCGCTGGTGGCCAACCTGGTGCTGATTGTC GGCGTGATGTCCCTGTTGCCGGGGGCGACGCTGACCATGCCGGGCATTGCCGGTATCGTGCTGACGCTGGCGGTGGCGGT CGACGCCAACGTACTGATAAACGAACGTATCAAGGAAGAGCTGAAGAATGGACGCTCCATTCAACAGGCGATCCATGAAG GCTATAAAGGCGCGTTCTCCAGTATTGTTGACGCCAACATCACTACCCTGATCACCGCCATCATTCTGTACGCAGTGGGC ACCGGTTCGATCAAGGGCTTTGCGATTACGACCGCAATCGGTGTGGCGACGTCCATGTTCACCGCGATTGTCGGTACCCG TGCCATCGTCAACCTGCTTTACGGCGGCAAACGCATTAACAAGCTGTCTATCTGA Protein sequence : MLIVVIIVGLLYALPNLYGEDPAVQITGARGVAASETTLDQVRTVLEKDNIASKSIALENGAILARFKDPDVQLRAREAL MAELGDKFVVALNLAPATPAWLAMLGAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQTMDTLRSELREKGIPYASIRKL DNNGVEVRFRDDAARDQAISYITPRQRDLVLSANGTNTLKASLTDARLSEAREYAVQQNITILRNRVNQLGVAEPLVQRQ GSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNADATAAANGRVPGDSEVKNTREGQPVVLYKRVILTGDHITDSTS STDEYNQPQVNISLDSAGGTSMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKQEEVINVANIQSRLGNSFRITGI GNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGQQNITQGLEACLWGLVASIVFMVVWYRKFGMIATTALVANLVLIV GVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELKNGRSIQQAIHEGYKGAFSSIVDANITTLITAIILYAVG TGSIKGFAITTAIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 5e-116 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-115 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-115 | 48 |
