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Name : secD (PSYCG_05790) Accession : YP_008163029.1 Strain : Psychrobacter sp. G Genome accession: NC_021661 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1299478 - 1301355 bp Length : 1878 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCAATATCCCGCTTGGAAATACCTACTCATCACCGTCGTACTTATCATTGCCGGTCTATACGCTGCTCCTAACCTATA TCCTGACGAACCTGCCGTACAGATTACTAGTGCTGCAGCAGGCACACAGTTGTCTGATGGCATTTTAACGCAGTCACAAG ACTTGTTAAAAGAAGCTGGCTTGAACTACCATGATGGTACGTTTAAAGGTAACAGTGCATTGGTACGTCTTGACAATCCA GTCGATCAGCTCAAAGCTCAGGAAGTATTGAGAAAAAACTTGGGTGAGAACTATGTGGTCGCACTGAACTTAGCGCAGAC AACGCCGCAGTGGTTGCGTGATATCGGCGCAAAGCCCATGAAACTTGGTCTTGATTTGCGTGGCGGCGTTCGTTTCGTCT TAGAAGTTGATATGGACAAGGCGCTCGAACAACGTCTGACCAGTGCCAGTCGCGATATTCGACGAGATCTAAGAGCTGAG CGCATTGCTGTTAAAGGTATCAAAAACGACAAGCGTAGCGTGGTATTGCATTTTTCTGATACAGATACTCGTAACCGTGC CCAAAACGTTTTGCAAAGTTCAATGGGTAACACCTTTGCCCTGCAATCTTCTATTGATGAGCAAGGCCCTGCCCTGATTT TGGCGTATAACGATGCAACGCTTGATGAAATCAACAGCTATGCGGTCAATCAAAACTTGACTACCCTACGCAATCGTATT GCTGAGCTTGGGGTAACAGAGGCCTTGGTACAATCACAAGGCGCTAGCCGTATCGTCGTTGAGCTACCAGGTGTACAAGA TACCGCTGAGGCAAAGCGCGTCCTTGGTCGTACGGCCAATCTTGAATTCCGTATGGTCGCTGAAGGTGCCGAAAACTATA CAGGCGGTATTCCACCTGCCGGTACTGAAGCGTTCCCATTTGAAACCCTTGATGGTCCGCCAGTATTATTGGAGCGCCAA GCGATTGTCACTGGTGATAAAGTTACCAATGCTCAAACCGGTATTGATGAAAGTGGGTCACCTGAGGTTAGTATTACCTT AGACAGTGCTGGTGGTAAGCTGATGCAGAATGCTACCCGTACAGCGGTTGGCAAACAAATGGCAGTATTGTTTATTGAAA ACAAACAACGCATCGCTTATGAAGAAGACCCAGCGACTGGCGAAACGATTGAAGTTCGGACGCCATATGCTGAAACAAAA GTCATTAACCGTGCAAATATCCAAGCAGTACTAGGCTCATCTTTCCGTATCACTGGTCTGGATAGTAGTGCTGAAGCCGC TGAGCTTGCATTGTTACTACGCTCAGGCGCGTTAGCGGCACCGATGTATTTCGTTGAAGAGCGCACCATTGGTCCATCAC TGGGTCAGGAAAATATCGATAAAGGGTTATTCTCTACGCAGGTTGGTTATTTATTAGTCTTTGCGTTTATGATTATCTTC TATCGTCTGTTTGGTGTGATTGCCAATATTGCTCTAGCAGTTAACGTTATTATTATTATCTCTATTATGTCCATCTTAGG CTCATCACTGACATTACCGGGTATCGCTGGTATCGTATTGACCATTGGTATGGCGGTCGATGCTAATGTTCTAATTTTTG AGCGTATTCGCGAGGAGATAGCTAATGGAGTGAGACCGAAATCGGCTATCGTGGCAGGTTTTGATCGCGCCTATAGTAGT ATTTTCGATGCCAATATCACAACCTTACTGGTCGCCTTTATCTTATTTGCAATTGGTACAGGTCCGATTAAAGGCTTTGC GATTACTTTAGCCATTGGTATTGTCAGCTCGCTGTTTACGGCTATTTTGGTAACCCGTGCACTGATACAAATTGCTTATG GTAAGCGTAAATCTATCAAACGTCTGAGCATCGGTTAG Protein sequence : MQYPAWKYLLITVVLIIAGLYAAPNLYPDEPAVQITSAAAGTQLSDGILTQSQDLLKEAGLNYHDGTFKGNSALVRLDNP VDQLKAQEVLRKNLGENYVVALNLAQTTPQWLRDIGAKPMKLGLDLRGGVRFVLEVDMDKALEQRLTSASRDIRRDLRAE RIAVKGIKNDKRSVVLHFSDTDTRNRAQNVLQSSMGNTFALQSSIDEQGPALILAYNDATLDEINSYAVNQNLTTLRNRI AELGVTEALVQSQGASRIVVELPGVQDTAEAKRVLGRTANLEFRMVAEGAENYTGGIPPAGTEAFPFETLDGPPVLLERQ AIVTGDKVTNAQTGIDESGSPEVSITLDSAGGKLMQNATRTAVGKQMAVLFIENKQRIAYEEDPATGETIEVRTPYAETK VINRANIQAVLGSSFRITGLDSSAEAAELALLLRSGALAAPMYFVEERTIGPSLGQENIDKGLFSTQVGYLLVFAFMIIF YRLFGVIANIALAVNVIIIISIMSILGSSLTLPGIAGIVLTIGMAVDANVLIFERIREEIANGVRPKSAIVAGFDRAYSS IFDANITTLLVAFILFAIGTGPIKGFAITLAIGIVSSLFTAILVTRALIQIAYGKRKSIKRLSIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 4e-134 | 52 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-134 | 52 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-134 | 52 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-134 | 52 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 9e-135 | 52 |
