Gene Information

Name : A606_01455 (A606_01455)
Accession : YP_008164808.1
Strain : Corynebacterium terpenotabidum Y-11
Genome accession: NC_021663
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 358497 - 361079 bp
Length : 2583 bp
Strand : +
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAGCGGATTCACCCCCACCACCCGCACCCAGGAGGCCATGCAGGCCGCCCTGCAGGCCGCCAGCGCGAACGGTAACCC
GGACATCCGGCCCGCCCACCTGCTGGTCGCCATCCTCGAACAGGAGGACTCCATCGCCCGCCCGGTCCTCCAGGCTGCCG
GTGTGGACGCCGACGACGTCCTGCGGGACGCCCGTGACCTCGTCGCCGGGTACGCCACGGCGTCCGGCCAGGGGCTGGCG
AACCCCAACTTCAACCGGGATGCGCTCAACGCATTGACCGCCGCCCAGGAGCTCGCCACCGAACTCGGGGACACCTACGT
CTCCACCGAGGTCCTCCTCGCCGGCATCGCCAAGGGCACCTCGGACGCCGCTGAGGCGCTGCAGACCCACGGCGGCACCT
ACGAGGCCGTCCGCGGGGCCTTCGAATCCGTCCGCGGCAACCGCAAGGTCACCACCGAGGAACCCGAGGGCCAGTTCCAG
GCGCTGGAGAAGTACTCCACCGACCTCACCGCCCGGGCCCGCGAAGGAAAGATTGACCCGGTCATCGGCCGCGACCAGGA
GATCCGTCGCGTCGTCCAGGTGCTGAGCCGCCGCACGAAGAACAACCCGGTCCTTATCGGCGAGCCCGGCGTCGGCAAGA
CCGCCATCGTCGAGGGCCTGGCCCGGCGCATCGTCGCCGGTGACGTGCCCGAGTCCCTGCGTGGCAAGAAGCTCATCAGC
CTGGATCTCGGGTCCATGGTCGCCGGCGCGAAGTACCGCGGCGAATTCGAGGAACGCCTCAAGGCCGTCCTCGACGAGAT
CAAGGAGGCCGAGGGCGAGGTCATCACCTTCATCGACGAGCTGCACACCATCGTCGGTGCCGGGGCCACCGGTGAATCCG
CGATGGATGCCGGCAACATGATCAAGCCGCTGCTCGCCCGTGGTGAGCTGCGCCTGGTCGGTGCCACGACCCTCGACGAG
TACCGCAAGTACATCGAGAAGGACGCCGCCCTGGAGCGCCGCTTCCAGCAGGTCTACGTCGGTGAACCGACGGTGGAGGA
CACCATCGGCATCCTCCGCGGCCTCAAGGAACGCTACGAGGTCCACCACGGCGTCCGGATCCAGGATTCCGCCCTGGTCG
CCGCCGCGACCCTCTCCGACCGCTACATCACCAGCCGCTTCCTGCCGGACAAGGCCATCGACCTCGTCGACGAGGCAGGA
TCCCGGCTGCGGATGGAGATCGACTCCCGTCCCGAGGAGATCGACGATGCCGAACGTGTCGTCCGCCGCCTCGAGATCGA
GGAGATGGCATTGAGCCAGGAGACCGATGACGCCTCCAAGGACCGCCTGGTCAAGCTGCGTGCGGAGCTGGAGGACGAGC
GGGAGAAGCTGTCCGGCCTCACCGCCCGCTGGGAGAACGAGAAGGGCGGCATCGACGCGGTCCGTTCGCTCAAGGAGGAC
CTTGACGCGTGCCGGACCGAATCCGAGATCGCCGAGCGTGACGGGGACTACGCCCGCGTCGCCGAACTGCGCTACGGGCG
CATCCCCGATCTGGAGAAGCAGCTCGCCGAGGCGGAGGCCTCCGCGGCCAAGGCCGAGGAGGAGCGCATGCTCACCGAGG
AGGTCACCCCGGACACCATCGCCGAGGTCGTCTCCGCGTGGACCGGCGTGCCGGCCGGCAAAATGCTGCAGGGCGAGACC
GAGAAGCTGCTCGCCATGGAGCAGGTCCTGGGTGGACGCGTCGTCGGCCAGACCGACGCCGTCACCGCGGTCTCCGATGC
GGTGCGGCGGTCCCGGGCCGGGGTCGCCGACCCGAACCGGCCGACCGGTTCCTTCCTCTTCCTGGGGCCCACCGGTGTCG
GCAAGACCGAGCTGGCGAAGGCCCTGGCGGAGTTCCTCTTCGACGATGATCACGCCATGGTCCGGATCGACATGTCCGAG
TACGGCGAGAAGCACTCCGTCGCCCGGCTGGTCGGTGCTCCCCCCGGATACGTCGGTTACGATGCCGGCGGCCAGCTCAC
CGAGGCGGTGCGGCGTCGTCCGTACACCGTCGTGCTCTTCGACGAGGTGGAGAAGGCCCACCCGGACGTCTTCGACGTCC
TGCTTCAGGTCCTCGACGAAGGACGCCTCACCGACGGTCAGGGTCGGACGGTGGACTTCCGCAACACCATCCTCATCCTC
ACCTCGAACCTCGGTGCCGGTGGCACGAATGAGCAGGTGATGGACGCGGTGAAGCACGCCTTCAAGCCGGAGTTCATCAA
CCGCCTCGACGACGTGGTCATCTTCGATGCCCTGTCCGCCGCCCAGCTGAGGTCCATCGTGGAGATCCAGGTCGCCCAGC
TCGCCGAGCGGCTCGCCGCCCGCCGGCTGGACCTGCAGGTCACCGAGGACGCGAAGGGATGGCTGGCAGAGCGCGGTTAT
GAGCCGGCCTACGGGGCCCGCCCGCTGCGCCGCCTGATCCAGAAGGCGGTCGGGGACGCGCTGGCGAAGAAGCTGCTCGC
CGGTGAGATCCGCGACGGTGACACGGTGCGGGTCGACGTCGACCCGCACATCGCCGACGGGGTGGACGCGCTGTCCATCG
AGGCTGTCGCCCACGAGGACTGA

Protein sequence :
MSGFTPTTRTQEAMQAALQAASANGNPDIRPAHLLVAILEQEDSIARPVLQAAGVDADDVLRDARDLVAGYATASGQGLA
NPNFNRDALNALTAAQELATELGDTYVSTEVLLAGIAKGTSDAAEALQTHGGTYEAVRGAFESVRGNRKVTTEEPEGQFQ
ALEKYSTDLTARAREGKIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVAGDVPESLRGKKLIS
LDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEVITFIDELHTIVGAGATGESAMDAGNMIKPLLARGELRLVGATTLDE
YRKYIEKDAALERRFQQVYVGEPTVEDTIGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLVDEAG
SRLRMEIDSRPEEIDDAERVVRRLEIEEMALSQETDDASKDRLVKLRAELEDEREKLSGLTARWENEKGGIDAVRSLKED
LDACRTESEIAERDGDYARVAELRYGRIPDLEKQLAEAEASAAKAEEERMLTEEVTPDTIAEVVSAWTGVPAGKMLQGET
EKLLAMEQVLGGRVVGQTDAVTAVSDAVRRSRAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFLFDDDHAMVRIDMSE
YGEKHSVARLVGAPPGYVGYDAGGQLTEAVRRRPYTVVLFDEVEKAHPDVFDVLLQVLDEGRLTDGQGRTVDFRNTILIL
TSNLGAGGTNEQVMDAVKHAFKPEFINRLDDVVIFDALSAAQLRSIVEIQVAQLAERLAARRLDLQVTEDAKGWLAERGY
EPAYGARPLRRLIQKAVGDALAKKLLAGEIRDGDTVRVDVDPHIADGVDALSIEAVAHED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-99 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A606_01455 YP_008164808.1 ATP-dependent Clp protease ATP-binding subunit VFG2084 Protein 6e-109 43