|
Name : secD (I607_13085) Accession : YP_008172660.1 Strain : Alteromonas macleodii Ionian Sea U4 Genome accession: NC_021710 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2932373 - 2934217 bp Length : 1845 bp Strand : - Note : COG0342 Preprotein translocase subunit SecD DNA sequence : GTGCTAAACAAAAACTCTATCTGGAAGGTACTGAGTGCACTCATTGTGGTTGCAATGTGTGCACTTTACGCACTTCCTAA CATTTACGGCGAAGATCATGCCGTACAAATCTCAGCAGGTCGTGATGCTGTGGTAACTAACGCCACGGTAGAGCAAGTAA AGGCCGCGCTAAACGAAAAAAACATCTCGCCGAAGCGTGTTGAGTTTGAGAACGACCAAATTTTGGTTCGCGTTTCTGAT TCAGATACACAGCTAGTAACCCGCGAAACTTTAGAAAAGACGCTTGGTGACGACTACTACGTGGCAATGAACCTTGCCCC AGACACGCCGGAATGGCTAGAAGGGTTAGGTGGCGCACCGATGAAACTTGGTCTTGACCTTCGCGGTGGTGTGCACTTCT TGATGGAAGTGGACATGACGGAAGTTATCACTAAGTCACTGGAAGATGCTGAAAGCGGCTTTCGCACCTCTCTGCGTGAA GAGGGTATTCGTTACCGTGGTGTTAAACAAGTAGACGACCATATCGACATTACCTTCCGCGATGAAGATACGTTAGATAA AGCGGAGTTCTTCCTGCGCAACCAAAGTCGTGACCTAACGTTTAACCAAATTGATGACTTAACCCTTCGCGCTATTTTCG CGGAGAGTAAGCTTCAAGAAATTCGCGACAACGCGGTTAAGCAAAACATCACTATCATTCGTAACCGTGTTAACCAGCTT GGTGTTGCTGAGCCTCTTGTTCAAAAACAAGGCGCTGACCGTATTGTTGTTCAGCTCCCCGGTATTCAAGATACCGCTCG TGCAAAAGAAATTCTAAACGCGACGGCGACCCTAGAATTCCGCATGGTTGATCAGAAAAACGATATTCGCGATGCATTGA ACGGCCGTGTTCCTCCTGGTTCTCAGGTGATTGAAGATCAGCAAGGTATTCCACAGTTACTTGAAAAGCGTATTATGCTT ACTGGTAGCCACATTATTGATGCTAATAGCGGTGTTGATGAATATGGTCTTCCAAATGTAAATATCTCGCTAGACTCTGA AGGCGGTAACAAAATGTCTCGCTCAACCCGCGGCAACATTGGTAAGCCAATGGCAACGGTGTTTATCGAGTACAAATCTA CCGGAGAGCGAAATGACGACGGTAAACTTGTGTTCGAAAAGCATGAGCAAGTTATCTCAGTTGCCACCATTCGTGCGCAG CTTGGTAGTAAGTTCCAAATTACCGGTCTTGATTCTCCAAAAGAAGCTCGTGATTTAGCGTTACTACTTCGCGCGGGTGC ACTTATTGCGCCAATTCAAATTGTTGAAGAGCGCACCGTAGGCCCAAGCTTGGGTAAAGAAAACATCGAGCTAGGTATGC AGGCTATTATCTATGGCCTTGCGGCTGTGCTTGTTTTCATGTTGATTTACTACAAAGCGTTTGGTGTGGTAGCGAACATC GCGCTTATCACTAACCTGGTAATGATTGTAGGCATCATGTCGATGATCCCGGGCGCAACCTTAACGCTTCCAGGTATGGC GGGTATTGTACTTACCGTTGGTATGGCGGTAGATGCTAACGTGCTAATCTTTGAGCGTATTCGTGAAGAGCTTCGCGAAG GGCGCAGTCCGCAGCAAGCTATTCACCACGGGTACGACAGTGCATTCTCAACCATTTTGGATGCGAATATCACTACTTTC ATTGCTGGTTTAATTCTGTTCGCAGTTGGTACCGGCCCAATTAAAGGCTTCTCTATTACGCTAATGATTGGTATCGCAAC TTCAATGTTTACCGCTATTTTGGTTACTCGCGTTATTGTTAACGCAGTATGGGGCGGCAAACGTGTAGAGAAATTAGCGA TTTAA Protein sequence : MLNKNSIWKVLSALIVVAMCALYALPNIYGEDHAVQISAGRDAVVTNATVEQVKAALNEKNISPKRVEFENDQILVRVSD SDTQLVTRETLEKTLGDDYYVAMNLAPDTPEWLEGLGGAPMKLGLDLRGGVHFLMEVDMTEVITKSLEDAESGFRTSLRE EGIRYRGVKQVDDHIDITFRDEDTLDKAEFFLRNQSRDLTFNQIDDLTLRAIFAESKLQEIRDNAVKQNITIIRNRVNQL GVAEPLVQKQGADRIVVQLPGIQDTARAKEILNATATLEFRMVDQKNDIRDALNGRVPPGSQVIEDQQGIPQLLEKRIML TGSHIIDANSGVDEYGLPNVNISLDSEGGNKMSRSTRGNIGKPMATVFIEYKSTGERNDDGKLVFEKHEQVISVATIRAQ LGSKFQITGLDSPKEARDLALLLRAGALIAPIQIVEERTVGPSLGKENIELGMQAIIYGLAAVLVFMLIYYKAFGVVANI ALITNLVMIVGIMSMIPGATLTLPGMAGIVLTVGMAVDANVLIFERIREELREGRSPQQAIHHGYDSAFSTILDANITTF IAGLILFAVGTGPIKGFSITLMIGIATSMFTAILVTRVIVNAVWGGKRVEKLAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-118 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-118 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-118 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-118 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 3e-118 | 47 |
