Gene Information

Name : rnhA (I636_08675)
Accession : YP_008183709.1
Strain : Alteromonas macleodii Ionian Sea UM4b
Genome accession: NC_021714
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 1940783 - 1941253 bp
Length : 471 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
GTGGCGCAAAAGACCATTCATATTTATACCGACGGCTCCTGTCTAGGCAACCCAGGCCCTGGTGGGTATGGTGCTGTATT
AATTTATAAACAGCATAAGAAAGAGCTAAGCGACGGATTTGCGCATACCACAAATAACCGCATGGAGTTGCTGGCCCCTA
TCGAAGCGCTAAACAGCCTGACTGAGCCTTGTGCGGTAGAACTCACTACCGACAGCCAGTATGTAAAAAATGGGATTAAC
CAATGGATCCATAACTGGCGCAAAAACGGTTGGCGTACGTCTGATAAAAAGCCAGTGAAAAATGCCGACTTATGGCAACG
CTTAGATGAAGCGGTGAAAAAGCATCAAGTGAACTGGCATTGGGTAAAAGGCCACTCGGGGCACCCCGAAAATGAACGCT
GCGATGAGCTTGCTCGCGGCGCCGCTGAGGCGAAACCAACTCAAATCGATGAAGGTTTCGTTGGCACCTAA

Protein sequence :
MAQKTIHIYTDGSCLGNPGPGGYGAVLIYKQHKKELSDGFAHTTNNRMELLAPIEALNSLTEPCAVELTTDSQYVKNGIN
QWIHNWRKNGWRTSDKKPVKNADLWQRLDEAVKKHQVNWHWVKGHSGHPENERCDELARGAAEAKPTQIDEGFVGT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 3e-50 65