Gene Information

Name : I636_04645 (I636_04645)
Accession : YP_008182917.1
Strain : Alteromonas macleodii Ionian Sea UM4b
Genome accession: NC_021714
Putative virulence/resistance : Unknown
Product : cytochrome c biogenesis factor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1028626 - 1030683 bp
Length : 2058 bp
Strand : +
Note : COG1138 Cytochrome c biogenesis factor

DNA sequence :
ATGGTACCTGAAATTGGAAATATTGCGCTGACGCTTGCGCTAGTGCTCTCTATATTATTGGCCGTTTATCCGCTATGGGG
GGCTCACCGTCAGCACGAAGCGTTAATGGCAACCGCCAAACCACTGGCAATTGGCTTATTCACCTTCACGCTTATTGCCT
ACGTGTGTTTAACGTACGCGTTTGTTACTGACGATTTTAGTGTGGCCTACGTTGCGCAACACTCAAATAGCCGATTGCCC
ATTTACTATAAGATTACTGCTGTTTGGGGCGGTCATGAAGGCTCTTTCCTACTGTGGGTATTGATGCTTTCAATCTGGAC
CGTGGCAGTAGCAATATTCAGTAAGGGGATACCTCTTGCCATGGTCGCTAGAGTACTGTCGGTATTGGGCATGGTAGGCA
TTGGTTTTTACTTATTTATGCTGCTTACCTCAAACCCCTTTGACAGCATGCTACCGTTTTTCCCGGTCGACGGGCGAGAT
CTTAATCCGCTGCTGCAAGATTTTGGTATGATTATTCATCCGCCTATGCTCTATATGGGGTACGTAGGCTTTTCTGTTGC
CTTTGCGTTCGCTATTTCTGCGTTAATTTCGGGGCAACTAGATTCGACATGGGCGCGGTGGTCTCGTCCTTGGGTGATTG
CAGCGTGGGCCTTTTTAACCGTGGGAATTGCCCTAGGTAGCTGGTGGGCATATTACGAACTCGGCTGGGGCGGCTGGTGG
TTTTGGGACCCGGTAGAAAATGCATCGTTTATGCCATGGCTTGTAGGCACGGCGCTCATGCATTCGCTGGCAGTGACCGA
AAAGCGAAAAGCGTTTAAATCATGGACAGTGCTGCTTGCTATTGCTGCATTTAGTTTGAGTTTACTAGGCACTTTCTTAG
TACGTTCCGGAGTTATTGTTTCGGTGCACTCTTTTGCAAGCGATCCTACTCGAGGCTTGTTCATCTTGGGCATATTGATT
GTACTTAGCGGTTTTGGGTTGCTGCTTTATGCCATGCGTGCAGCCTCGCTTAAAAGCCCTGGGCGCTACCAAGCGTTTTC
TCGAGAAGTGCTGTTAATGGGCAACAATGTCTTTCTGTGCGCAGCAACATTAGTTGTTCTTCTCGGTACGCTACTGCCCC
TTGTTCACAAAGAGTTAGGCTTAGGCAGTATTTCTGTAGGCGCGCCGTTCTTTAACCAAATGTTTACGCTTCTCATTGTG
CCTTTTGTATTAATGCTGGGTTTAGGTCCACTAACGCGCTGGAAACAGCAAAAAGCCAGCGAACTGCAAAAACAACTATT
GGTCGCAGGCGGTATTGCACTAAGTGCAGGTGTACTAGTGAACTTTGCTTACGACGAACCCACTTACATGGGGGTACTGG
GCATGGTGCTGGTTTTCTGGATCCTCGTCACCACGGTACAAGAGGTAATGCAGCGCTTAGCGGCTATGCCTTCGTCGAAC
ACCGAGAATGCATCAGTAATAGCTAAACTTCGCAAGCTTACGCCAAGTCACTGGGGCATGGTGCTAGGCCATGTGGGCTT
TGCTATCTGTATTATTGGCATTACGCTGGTTTCCAATTATGAACTTGAGCGCGACGTACGTATGGATATCGGCGATACCG
TCTCGCTGGGTGGCTATGACTTTAGCTTTAGAGATGTACGGAAGGTGGAAGGTCCGAATTTTAATGCAGATAAAGGCATA
TTCGATGTTTATAAAAATGGTGAAATGATAGCGCATCTAGAGCCAGAGAAACGTTTGTACATTGTGCAGCGCATGCCCAT
GACAGAAGCGGCCATCCACTCAAACTTGGCGCGTGATCTATTCATTGCCATGGGCGAGCCGTTAGACAATGGCGCATGGG
CTATTCGTATTTACATTAAACCGTTTGTTATCTGGCTATGGGCGGGTGCGGTTGTTATGGCGATAGGCGGTATTTTTTCT
ATTAGTGATAAGCGCTACCGCATGGCGAAAGTGAAAAAGTTGAAACGTGTACTTGGCAGTAAATCTGTAGCTTCAACAGG
TACACCAAATACCCACGCCTCTGCCGTGTCACGAGTATCCACAAAAGGAGATGCATAA

Protein sequence :
MVPEIGNIALTLALVLSILLAVYPLWGAHRQHEALMATAKPLAIGLFTFTLIAYVCLTYAFVTDDFSVAYVAQHSNSRLP
IYYKITAVWGGHEGSFLLWVLMLSIWTVAVAIFSKGIPLAMVARVLSVLGMVGIGFYLFMLLTSNPFDSMLPFFPVDGRD
LNPLLQDFGMIIHPPMLYMGYVGFSVAFAFAISALISGQLDSTWARWSRPWVIAAWAFLTVGIALGSWWAYYELGWGGWW
FWDPVENASFMPWLVGTALMHSLAVTEKRKAFKSWTVLLAIAAFSLSLLGTFLVRSGVIVSVHSFASDPTRGLFILGILI
VLSGFGLLLYAMRAASLKSPGRYQAFSREVLLMGNNVFLCAATLVVLLGTLLPLVHKELGLGSISVGAPFFNQMFTLLIV
PFVLMLGLGPLTRWKQQKASELQKQLLVAGGIALSAGVLVNFAYDEPTYMGVLGMVLVFWILVTTVQEVMQRLAAMPSSN
TENASVIAKLRKLTPSHWGMVLGHVGFAICIIGITLVSNYELERDVRMDIGDTVSLGGYDFSFRDVRKVEGPNFNADKGI
FDVYKNGEMIAHLEPEKRLYIVQRMPMTEAAIHSNLARDLFIAMGEPLDNGAWAIRIYIKPFVIWLWAGAVVMAIGGIFS
ISDKRYRMAKVKKLKRVLGSKSVASTGTPNTHASAVSRVSTKGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 4e-150 57
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 5e-143 54