Gene Information

Name : LOCK919_2754 (LOCK919_2754)
Accession : YP_008201236.1
Strain : Lactobacillus casei LOCK919
Genome accession: NC_021721
Putative virulence/resistance : Virulence
Product : Lysyl-tRNA synthetase, class II
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2692740 - 2694239 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
GTGTTGGCTAAGGATAACGGACAGCAACCAGAAATGAATGACCAAATGATTGCGCGGCGAGAAAAGATGGAAGCCTTGCG
TGAAGCGGGCATCGATCCATTCGGGCACCGATTTGACCGGACCCATACCGCAGCGAAAGTACGCGAAGAATTCGGTGAAG
ATGATAAAGAGACACTGTTGGATGAAAAACCAGAAGTGACAATTGCCGGCCGGATGATGTCTAAACGTGGCAAAGGCAAG
GTTGGATTTGCGGATATTCGTGATCGTAGCGGGAAGATGCAGATCTATGTACGTAAAGATGTCGTTGGCGATGACAACTA
CATGATCTTCAAAAAGGCCGATCTTGGCGATATTCTTGGTATCAGCGGTGAAGTCATGAAAACTGATTCTGGCGAGCTGA
CGGTTAAAGCCAACCATGTGACCCATCTTGCTAAGGCACTCCGCCCATTACCTGATAAGTGGCATGGTCTGACCGATGTC
GAGCAAAAGTATCGGAAACGTTACCTTGATCTTATTTCTAATGAGGACAGCTTTGATCGTTTTGTTAAGCGAACCAAGAT
TGTCAGTGCTGTCCGTGAATACTTGGACAACAATGGTTTCTTGGAAGTCGAGACACCAGTCTTACACAATCAGGCTGGCG
GGGCGAATGCTCGTCCATTCGTGACTCATCACAATGCACTTGATATTGATTTATATTTGCGGATTGCTCTTGAACTGCAC
TTAAAGCGTCTAATTGTTGGCGGCATGGAACGTGTTTATGAAATTGGCCGAGTTTTTCGGAATGAGGGGATTGATACCAA
GCATAATCCCGAGTTCACTGAACTTGAAACTTATGCCGCCTACTGGGATTTGACAGATGTTATGACCGAAACTGAAGGGA
TTTTCCGGTTTGCTGCGCATAAGGTGCTAGATACCGGGAAGCTCACCTATCAGGGAATGGCGATTGATCTGGACGCACCG
TTTGCCCGAATTAATATGTTGGACGCCATTAAAGACAAGACTGGCGTGGACTTCTGGCCTGAAATGAGTGTCGATGATGC
GCGTAAACTTGCCGATGAACATGATGTTCACTATGAACCTTATTGGAAGGTGGGCCATATTATCAGTGCCTTCTTCGATC
AGTTTGTCGAAGAGACGCTCATTCAGCCGACCTTCATCACGGGCCATCCAATCGAGGTTTCACCACTGGCAAAGAAGAAT
CCAAAAGATCCGCGGTTTGTTGAACGTTTTGAACTATTTGTTGGTGGCGGTGAATACGCCAATGCCTTTACAGAATTAAA
CGATCCAATTGATCAACGCCAGCGTTTTGAGGCGCAGGCAGCTGAAAAGAGTGCTGGTAATGACGAAGCACAAGGTATCG
ATGACGATTACGTTGAAGCTTTGGAATACGGCATGCCGCCAACTGGTGGTCTCGGAATCGGGATTGATCGCTTAGTCATG
TTGCTGACTGATGCACCATCCATTCGCGATGTCCTTTTGTTCCCAACATTGCGGCCATAA

Protein sequence :
MLAKDNGQQPEMNDQMIARREKMEALREAGIDPFGHRFDRTHTAAKVREEFGEDDKETLLDEKPEVTIAGRMMSKRGKGK
VGFADIRDRSGKMQIYVRKDVVGDDNYMIFKKADLGDILGISGEVMKTDSGELTVKANHVTHLAKALRPLPDKWHGLTDV
EQKYRKRYLDLISNEDSFDRFVKRTKIVSAVREYLDNNGFLEVETPVLHNQAGGANARPFVTHHNALDIDLYLRIALELH
LKRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTELETYAAYWDLTDVMTETEGIFRFAAHKVLDTGKLTYQGMAIDLDAP
FARINMLDAIKDKTGVDFWPEMSVDDARKLADEHDVHYEPYWKVGHIISAFFDQFVEETLIQPTFITGHPIEVSPLAKKN
PKDPRFVERFELFVGGGEYANAFTELNDPIDQRQRFEAQAAEKSAGNDEAQGIDDDYVEALEYGMPPTGGLGIGIDRLVM
LLTDAPSIRDVLLFPTLRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-113 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK919_2754 YP_008201236.1 Lysyl-tRNA synthetase, class II VFG1668 Protein 6e-114 46