Gene Information

Name : LOCK900_0121 (LOCK900_0121)
Accession : YP_008201798.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YvcR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 127223 - 127927 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAAATTTATCACGGTAAAAGATGAAACCAGACAATATGGCTCAGGTGAAAGTACTGTTTATGCCAATCATAATGT
TTCGTTTGAAATCAATTCAGGTGAGATCACCGTCATTTTAGGGGCTTCAGGTGCAGGCAAATCAACTTTGCTGAATATTC
TGGGCGGGATGGATAAAGCCACCAGTGGTCAGGTCACAGTGGCAGGTGAGAACATTTCTCAATATGATGCGCGGCAGTTG
ACAACATTTCGGCGCGAGCAGGTTGGGTTTGTCTTCCAATTCTACAACCTGGTACCGAACTTAACCGCACTGGAAAATGT
TGAACTAGCCAGCGAAATTGCGCCGGACGCATTAGATCCGCAAAAGACGTTGGTGGACGTCGGGTTGGGCAAAAGAATGA
ATAACTTCCCAGCTCAGCTTTCCGGTGGGGAACAACAGCGGGTGGCGATTGCGCGGGCGATTGCCAAGAACCCGTCACTG
TTATTGGCAGATGAGCCAACCGGGGCGCTGGATTATAAGACCGGGAAAAGCATTTTGAAACTTTTTGAAGACTTTTCCCA
CCAAACTGATAAGAATGTCATTATTGTGACGCATAACTCGTTGATTAAGCCCATGGCCGATCACGTCATTGAGATTCATG
ATGGCGAGGTCAAAGATGACTATCACAATGATCAGCCCACACCGGTCGAACAATTGAAATGGTAG

Protein sequence : 
MAKFITVKDETRQYGSGESTVYANHNVSFEINSGEITVILGASGAGKSTLLNILGGMDKATSGQVTVAGENISQYDARQL
TTFRREQVGFVFQFYNLVPNLTALENVELASEIAPDALDPQKTLVDVGLGKRMNNFPAQLSGGEQQRVAIARAIAKNPSL
LLADEPTGALDYKTGKSILKLFEDFSHQTDKNVIIVTHNSLIKPMADHVIEIHDGEVKDDYHNDQPTPVEQLKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK900_0121 YP_008201798.1 ABC transporter ATP-binding protein YvcR NC_012469.1.7685735. Protein 1e-64 59
LOCK900_0121 YP_008201798.1 ABC transporter ATP-binding protein YvcR NC_012469.1.7686878. Protein 2e-36 42
LOCK900_0121 YP_008201798.1 ABC transporter ATP-binding protein YvcR CP001581.1.gene598.p Protein 5e-36 42