Gene Information

Name : LOCK900_0029 (LOCK900_0029)
Accession : YP_008201706.1
Strain : Lactobacillus rhamnosus LOCK900
Genome accession: NC_021723
Putative virulence/resistance : Resistance
Product : ABC-type antimicrobial peptide transport system, ATPase component
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 28076 - 28777 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATATATCGAAGTAAAACATGAATCAAAACGTTACCAAATGGGCGAAACCGTCATCACCGCCAACCACGATATTAA
TTTTTCGGCTGATCAAGGTAAGCTCACGGTCATTCTAGGTCCCAGCGGTGCCGGTAAATCGACATTGCTGAATATTCTAG
GCGGAATGGATTCGCCAACAGAAGGTGAAGTCTGGATTGACGGGACGGATATTGCAACTTTTTCGGATCGCCAATTGACA
GCTTTTCGACGGCACAATGTCGGCTTTGTTTTTCAGTTTTATAATCTGATTCCTAACCTGACGACTAAGGAAAATGTTGA
ACTGGCTGGCTCGATTGTCGCCGATGCATTGGATCCCACCACGGTCCTTAAACAAGTCGGCTTAGGTGCCCGGCTGGATA
ATTTTCCTTCGCAGCTTTCCGGTGGCGAGCAGCAACGCGTGGCCATCGCTCGAGCTTTGGCGAAGAATCCGAAACTGCTT
TTATGTGATGAACCGACTGGCGCATTGGATTACAAAACCGGTAAACAGGTCTTGCAGCTGTTGCAAGATGCCAGCCGCAA
AGACCATAAAACCGTCTTGATCATCACCCATAATGCCGCGATTGCCAAAATGGCGGATCGGGTTGTTGAGATCAATGATG
CCCAGGTTCGCAGCATTCATGACGAGCCGGCACCGACACCGGTAGCGGACATCGAGTGGTAG

Protein sequence : 
MAYIEVKHESKRYQMGETVITANHDINFSADQGKLTVILGPSGAGKSTLLNILGGMDSPTEGEVWIDGTDIATFSDRQLT
AFRRHNVGFVFQFYNLIPNLTTKENVELAGSIVADALDPTTVLKQVGLGARLDNFPSQLSGGEQQRVAIARALAKNPKLL
LCDEPTGALDYKTGKQVLQLLQDASRKDHKTVLIITHNAAIAKMADRVVEINDAQVRSIHDEPAPTPVADIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK900_0029 YP_008201706.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7685735. Protein 3e-74 64
LOCK900_0029 YP_008201706.1 ABC-type antimicrobial peptide transport system, ATPase component CP001581.1.gene798.p Protein 1e-42 46
LOCK900_0029 YP_008201706.1 ABC-type antimicrobial peptide transport system, ATPase component NC_012469.1.7686878. Protein 3e-37 41