Gene Information

Name : LOCK908_0133 (LOCK908_0133)
Accession : YP_008204677.1
Strain : Lactobacillus rhamnosus LOCK908
Genome accession: NC_021725
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YvcR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 145837 - 146541 bp
Length : 705 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAATTTATCACGGTAAAAGATGAAACCAGACAATATGGCTCAGGTGAAAGTACTGTTTATGCCAATCATAATGT
TTCGTTTGAAATCAATTCAGGTGAGATCACCGTCATTTTAGGGGCTTCAGGTGCAGGCAAATCAACTTTGCTGAATATTC
TGGGCGGGATGGATAAAGCCACCAGTGGTCAGGTCACAGTGGCAGGTGAGAACATTTCTCAATATGATGCGCGGCAGTTG
ACAACATTTCGGCGCGAGCAGGTTGGGTTTGTCTTCCAATTCTACAACCTGGTACCGAACTTAACCGCACTGGAAAATGT
TGAACTAGCCAGCGAAATTGCGCCGGACGCATTAGATCCGCAAAAGACGTTGGTGGACGTCGGGTTGGGCAAAAGAATGA
ATAACTTCCCAGCTCAGCTTTCTGGTGGGGAACAACAGCGGGTGGCGATTGCGCGGGCGATTGCCAAGAACCCGTCACTG
TTATTGGCAGATGAGCCAACCGGGGCGCTGGATTATAAGACCGGGAAAAGCATTTTGAAACTTTTTGAAGACTTTTCCCA
CCAAACTGATAAGAATGTCATTATTGTGACGCATAACTCGTTGATTAAGCCCATGGCCGATCACGTCATTGAGATTCATG
ATGGCGAGGTCAAAGATGACTATCACAATGATCAGCCCACACCGGTCGAACAATTGAAATGGTAG

Protein sequence :
MAKFITVKDETRQYGSGESTVYANHNVSFEINSGEITVILGASGAGKSTLLNILGGMDKATSGQVTVAGENISQYDARQL
TTFRREQVGFVFQFYNLVPNLTALENVELASEIAPDALDPQKTLVDVGLGKRMNNFPAQLSGGEQQRVAIARAIAKNPSL
LLADEPTGALDYKTGKSILKLFEDFSHQTDKNVIIVTHNSLIKPMADHVIEIHDGEVKDDYHNDQPTPVEQLKW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LOCK908_0133 YP_008204677.1 ABC transporter ATP-binding protein YvcR NC_012469.1.7685735. Protein 1e-64 59
LOCK908_0133 YP_008204677.1 ABC transporter ATP-binding protein YvcR NC_012469.1.7686878. Protein 2e-36 42
LOCK908_0133 YP_008204677.1 ABC transporter ATP-binding protein YvcR CP001581.1.gene598.p Protein 5e-36 42