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Name : J450_09615 (J450_09615) Accession : YP_008220910.1 Strain : Mannheimia haemolytica D171 Genome accession: NC_021738 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 1991196 - 1993100 bp Length : 1905 bp Strand : + Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTACCGGAACTCGGCTATTTTTCACTTTTATTGGCTGCAATTAGTGCCATTTTTCAAGTTGGTTTTGCACTTCTAGG CGAAGTTCGCAAGCAATATCATTGGCTGGCATTGGCTCCGCTTTTCACTTATTTGCAAGCTGCTTTTACCACATTTTCCT TTTCTACCTTAGCTTATGCTTTTCTAACCGATGATTTTTCGGTTATCTACGTTGCCGCTCATTCCAACAGCCAGCTCCCC GATTTTTTTAAATTTGCCGCCACTTGGGGCGGACACGAAGGTTCAATGCTGTTTTGGCTCACCGCTCTTGTGATTTGGTC TGCGGTATTTTGCAAATTTTCGCAAAAAATTGACCGCTTGTTTGCCAACCGAACCTTAGCGATGTTAGGGCTAATTGCAC TAGGTTTTCTACTTTTCATTCTATTGGTTTCCAGCCCATTTGAACGTGGCTTTCCACCACCACCTGAAGGGCGAGATCTC AACCCAATGTTGCAAGATATTGGGCTCATCTTTCACCCGCCTTTGCTCTACTTGGGCTATGTCGGCTTTGCGGTGAGCTT TGCAATGATTGTCGCCGCCCTCGTTTCAGGCGGAATGGACGCTGCGATTATGCGTTGGCTTCGTCCGTGGACGATGATTT CGTGGGGATTTCTCACCGCCGGCATTATTTTAGGGGCGTGGTGGGCATATTACGAACTCGGCTGGGGTGGCTGGTGGTTT TGGGATCCGGTGGAAAATGCCTCCCTAATGCCTTGGCTACTTGGCACCGCATTGGTGCATAGTTTAATTGTGAGCCAACA GCGTGGCATTTTCTATTATTGGACGATTCTACTTGCCATTTTCGCCTTTGCTTTAAGCCTATTAGGCACGTTTATTGTTC GTTCGGGTGTACTGACCTCGGTTCATGCCTTTGCGGTCGATCCCGACAGAGGAATGGCACTGCTGATCTTATTCTTCGGC TTAAGTTTCATTGCCCTTGCTCTGTTTGCATTCCGAGCGAATCTCTGGCAAGGCAAAGTGCGTTTCAACTTACTTTCTAA AGAAACGGCATTTTTATTGATTAACGGCTTATTTAGTGTGGCTGCTTCTGTGGTATTGCTGGGGACTTTCTACCCGATGA TCTTCACAGTGATGAATTGGGGATCGATTTCAGTGGGGGCCCCCTATTTCAATAGCGTATTCACGCCACTAGCGTTACTG TTAATGATAGTAATGGGCTTTGCGGTGGTGCTGGGCTGGAAACAGATTTCAAATAAGCAGATATTGGTAAAACTTTGGTT GCTGCCGATTGCAGTCGGTTTAGCGTTAGGGTTGATTTATGCCTCCATCTCGCAAAGAGAGCATTTTGCTTTGCAGCCGT TACCCACCATATTTATCAGCCTTGCGATCTGGATTATTCTCACTCATTTGCCCTATTCGCAAAAAATGTGGCAAATTCGA CCGCTTGCGATGCGGTTAGCCCATATCGGCTTTGCGGTTTGCGTGATTGGGGCAATGATGAACAGTTATTACGGCGATGA AATCGGCGTGCGGTTAAAGCCGAATCAAGCAGCGGAACTTGCCGGTTATACCTTTAAATATGAAGATTATCACGATCTCA TCGGTCCGAACTACACCGCCGAGCAAGCCGTTTTTTCTATCAGCCGAGATGAACAGTTGCTGGCAACCGTCACACCGGAA AGACGCTATTATGATGTAAGAACGATGACAATGGCAGAAGTAGGGCTTTTCCACCACAATTTAGACGATATTTATATTGT GATGGGGGATAAGTTCGGCAATTTAGAATATGCCTTCCGTTTGCACTATAAGCCTTATGTGCAAGCCTTATGGTTAGGTG GTATGATGATGGTAATGGCCGCCCTGTTGGCATTATTCGGTTATCGTAGAGAAAACAAAAAATGA Protein sequence : MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTYLQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLP DFFKFAATWGGHEGSMLFWLTALVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFLTAGIILGAWWAYYELGWGGWWF WDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTILLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFG LSFIALALFAFRANLWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNSVFTPLALL LMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFALQPLPTIFISLAIWIILTHLPYSQKMWQIR PLAMRLAHIGFAVCVIGAMMNSYYGDEIGVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPE RRYYDVRTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLALFGYRRENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-91 | 43 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-83 | 42 |
