Gene Information

Name : M495_21125 (M495_21125)
Accession : YP_008232132.1
Strain : Serratia liquefaciens ATCC 27592
Genome accession: NC_021741
Putative virulence/resistance : Virulence
Product : amino acid ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4430475 - 4432604 bp
Length : 2130 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
ATGTCAATTCTTTTTCGTCTTTCGCTGTTGGCGGCTTCCGTTGCCATGGCGCTGCCAGTCCTTGCTGCTGATAATAAATC
TCAAAATGATGCGCCAGCCGACACTATTACCGTCGTCGGCAACTGGCTGGATAACCCGGATACCAGTTCGGTGTTGCTCA
ACCACCCCGGCGCACGTTCCATCGTGACCGAACAACAAATGCATGAACAAGGCGATCAGACCATTGCCGATACCCTGCGC
GGCGTGCCTGGCGTGCAGGTGCGCGACAGCAACGGTACCGGCGGCAGCGATATTTCGCTCAACGTCGGCGTACGTGGCCT
GACTTCTCGCCTTTCACCTCGCTCCACCATTTTGATGGACGGCGTCCCCTTGGCGGTCGCGCCTTACGGCCAGCCACAGC
TGTCGATGGCACCGCTGTCGATTGGCAGCCTGCAATCGGTTGACGTGGTGCGCGGCGGTGGCGCGGTGCGTTACGGGCCG
CAAAACGTCGGCGGCGTGATTAACTTCGTCACCAAGGACATCCCGAAAACCTTCGGTGGCGCGGCCAGCGTCCAGACCCA
GGGGGCCAGCCACGGCGGCCTGAAAACCCTGACCAGCACCTCGCTCGGCGGCACCGCCGACAACGGTTTCGGTGCAGAGC
TGCTGTATTCCGGCCTGCACGGCCAGGGCTATCGCGACAACAACGACAATACCGACATCGACGATTTCATGCTGAAAACG
CGCTATGCGTTTACCGATCGCGATGAGTTACTGGCCAATTTCCACTATTACGACGCAAAATCCGGTATGCCTGGCGGGCT
GAGCAGCGCGCAGTATGCGCAAAATCCGTTCCAGTCGACCCGTCCGTGGGACCAGTTCGAAGGCCGCCGCAAGGATATGT
CGTTCAAATATAAGCACCAGGAAGACGACAAGCAGTTCGAAGTGCTGACGTATTTCACCGACAGCTATCGCGGCAGCAGC
ATCGAATCGGAAGGCACCGGTAAAAACGCCGGGATGAAGCGTATGGTGTCTTACCCACGCCACTACTCCACCTGGGCGAT
TGAACCCAGCTACTCGCAGGTCTTCCGTTTCTGGGACATGGCGCACGAGATCACCCTCGGCTACCGCTACCTGAACGAAA
CCATGGATGAAAAAGCGTCCCGTTCAGCCTGGTACAACCCGGCAGATATCGGTTCTACGCCGGAAACGCCGGATTACTAT
CAGCACACCTCCGGCGGCACCGCAGCCCACGCACTCTACATTGACGACACCATTAACGTCGGCAACTGGACGGTTACGCC
GGGCCTCCGCTATGAAAGCATCCGCACCCATGTGGACGATTCGTTCAACAACATCAGCCGCGAGAAGAGCTACAGCGAAC
CGCTGCCGTCACTGAACGTCATGTACCACATGTCAGACGCCTGGAAGCTGTTCGCCAACGCCAACACCTCGTTCGGCAGC
ATGCAGTACTTCCAGCTGACCAAGGGTGGCAACGGCAACCAACCCGCGCCGGGCCTGACGGCGGAAAAAGCCCATACCTA
TGAATTCGGTACCCGTTATGACGACACCATCGTCAAAGCCGAGGCCACGCTGTTCTATATCGATTTCGATAACCAGCTGC
AGTACATCAGCAACGACGTCGGCTGGACCAACATGGGCGCCACCAAGCACAAGGGTATCGAGCTGGCGCTCAGCTACGAT
CTCAGCGAACTGAACCGCGCGCTGGATGGCGTAAGCGTCTATACCAGCTACACCTATACCAAAGCCAGCACCGACAAGGG
CGACTTCGCCGGTAAGGATTTGCCGTTCTATTCACGCCAGGTGTATACCGTCGGCACCCGCTACGCCACCGGCAGTTGGG
TGTGGAATCTGGACAGCTATGCCCAGTCCAAGCAGCACTCGCCGGGCACCGGGCCGGATTACGTCACGCAGGAAAGCGCC
GACGGCCAGTTTGGCAACATCGCCGGGTATATGGTGTGGAATATGCGTGGTGAGTATAACTTCGGGCCGCAGCTGTCGAA
TCTGACGCTGGGTGCCGGGGTGAAAAACCTGTTCGATCAGCGCTACTTCACCCGCTCCAACGACAACAACTTCGGCAAAT
ACGTCGGTGAACCACGCACCTTCTTCGTGCAGGGTTCCGTGGCATTCTAA

Protein sequence :
MSILFRLSLLAASVAMALPVLAADNKSQNDAPADTITVVGNWLDNPDTSSVLLNHPGARSIVTEQQMHEQGDQTIADTLR
GVPGVQVRDSNGTGGSDISLNVGVRGLTSRLSPRSTILMDGVPLAVAPYGQPQLSMAPLSIGSLQSVDVVRGGGAVRYGP
QNVGGVINFVTKDIPKTFGGAASVQTQGASHGGLKTLTSTSLGGTADNGFGAELLYSGLHGQGYRDNNDNTDIDDFMLKT
RYAFTDRDELLANFHYYDAKSGMPGGLSSAQYAQNPFQSTRPWDQFEGRRKDMSFKYKHQEDDKQFEVLTYFTDSYRGSS
IESEGTGKNAGMKRMVSYPRHYSTWAIEPSYSQVFRFWDMAHEITLGYRYLNETMDEKASRSAWYNPADIGSTPETPDYY
QHTSGGTAAHALYIDDTINVGNWTVTPGLRYESIRTHVDDSFNNISREKSYSEPLPSLNVMYHMSDAWKLFANANTSFGS
MQYFQLTKGGNGNQPAPGLTAEKAHTYEFGTRYDDTIVKAEATLFYIDFDNQLQYISNDVGWTNMGATKHKGIELALSYD
LSELNRALDGVSVYTSYTYTKASTDKGDFAGKDLPFYSRQVYTVGTRYATGSWVWNLDSYAQSKQHSPGTGPDYVTQESA
DGQFGNIAGYMVWNMRGEYNFGPQLSNLTLGAGVKNLFDQRYFTRSNDNNFGKYVGEPRTFFVQGSVAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecA AAL08456.2 FecA Not tested SRL Protein 4e-133 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
M495_21125 YP_008232132.1 amino acid ABC transporter substrate-binding protein VFG1047 Protein 3e-133 45