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Name : secD (M495_04540) Accession : YP_008228875.1 Strain : Serratia liquefaciens ATCC 27592 Genome accession: NC_021741 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 982395 - 984209 bp Length : 1815 bp Strand : + Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGCTGATCGTGGTGATCTTCATCGGTCTGCTTTACGCGCTTCCCAACATCTATGGTGAGGATCCGGCTGTACAAATCAC TGGCGCGCGCGGTGTCGCCGCCAGTGAAACTACACTGGACCAAGTCCGTACCGTATTAGAAAAAGACAAGATTACGAGCA AGTCGATTGCGCTGGAAAATGGCGCCATCCTGGCTCGCTTTAGCAATCCTGATATTCAGCTGCGCGCCCGTGAAGCCCTG ATGGCGGAACTGGGTGACAAGTTCGTGGTTGCGCTGAACCTGGCGCCGGCCACACCAGCCTGGTTGGCCATGCTGGGCGC CGAACCGATGAAACTCGGTCTGGACCTGCGCGGTGGCGTGCACTTCCTGATGGAAGTCGACATGGACACTGCCCTGAGCA AGCTGCAGGAACAGACCATGGATACCCTGCGCAGCGAGCTGCGTGAAAAGGGCATTCCTTATGCGTCTATCCGCAAGCTG GACAACAACGGCGTGGAAGTACGTTTCCGTGACGATGCTGCCCGCGATCAGGCCATCAGCTACCTCAGTCCGCGTCAGCG CGATATGGTGTTCTCTGCCAACGGCAGCAACACCCTGAAAGCCAACCTGACGGATGCCCGTCTGAGCGAAGCGCGCGAAT ACGCGGTACAGCAGAACATCACTATCCTGCGTAACCGCGTTAACCAGCTCGGCGTTGCCGAACCGCTGGTGCAGCGTCAG GGCTCCGACCGCATCGTGGTCGAACTGCCGGGCATTCAGGATACCGCTCGCGCCAAAGAGATCCTCGGCGCTACCGCTAC GCTGGAATTCCGCCTGGTTAACACCAATGCGGACGTCACGGCTGCGGCAAATGGCCGTGTCCCAGGCGACTCAGAAGTGA AAGACACCCGTGAAGGCCAGCCTGTCGTGCTGTACAAGCGTGTGATCCTGACCGGTGACCATATCACCGACTCCACTTCC AGCACCGACGAATATAACCAACCGCAGGTGAACATCTCGCTGGACAGTGCCGGCGGCACTGCGATGTCCAACTTCACCAA GGACAATATCGGCAAGCCGATGGCGACCCTGTTTGTGGAGTACAAGGACAGCGGCAAGAAAGACGCCAATGGCCGTGCGA TTCTGGTGAAACAGGAAGAAGTGATCAACGTGGCGAACATTCAGTCACGTCTGGGCAACAGCTTCCGTATTACCGGTATC GGCAACCCGAACGAAGCACGTCAGCTTTCGCTGCTGCTGCGTGCCGGTGCGCTGATTGCGCCAATCCAGATTGTGGAAGA GCGTACAATCGGCCCGACCCTGGGACAACAGAACATCACCCAAGGTCTGGAAGCCTGCTTGTGGGGCTTGGTGGCATCCA TCGTGTTTATGGTGGTTTGGTACCGTAAGTTCGGCATGATCGCCACCACGGCGCTGGTCGCCAACCTGGTGCTGATTGTC GGCGTGATGTCCCTGCTGCCGGGGGCGACGCTGACCATGCCGGGGATTGCCGGTATCGTGCTGACGCTGGCGGTGGCGGT CGACGCCAACGTACTGATTAACGAACGTATCAAGGAAGAGCTGAAGAACGGACGTTCCGTTCAGCAGGCGATCCATGAGG GCTATAAAGGCGCGTTCTCCAGTATCGTTGACGCCAACATCACCACCCTGATCACCGCGATCATTCTGTACGCAGTAGGT ACCGGTTCGATCAAGGGCTTTGCGATTACCACCGCAATCGGTGTGGCGACGTCCATGTTCACCGCGATTGTCGGTACCCG TGCCATCGTCAACCTGCTTTACGGCGGCAAACGCATTAACAAGCTGTCTATCTGA Protein sequence : MLIVVIFIGLLYALPNIYGEDPAVQITGARGVAASETTLDQVRTVLEKDKITSKSIALENGAILARFSNPDIQLRAREAL MAELGDKFVVALNLAPATPAWLAMLGAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDTLRSELREKGIPYASIRKL DNNGVEVRFRDDAARDQAISYLSPRQRDMVFSANGSNTLKANLTDARLSEAREYAVQQNITILRNRVNQLGVAEPLVQRQ GSDRIVVELPGIQDTARAKEILGATATLEFRLVNTNADVTAAANGRVPGDSEVKDTREGQPVVLYKRVILTGDHITDSTS STDEYNQPQVNISLDSAGGTAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKQEEVINVANIQSRLGNSFRITGI GNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGQQNITQGLEACLWGLVASIVFMVVWYRKFGMIATTALVANLVLIV GVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELKNGRSVQQAIHEGYKGAFSSIVDANITTLITAIILYAVG TGSIKGFAITTAIGVATSMFTAIVGTRAIVNLLYGGKRINKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-114 | 48 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-113 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-113 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-113 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-113 | 48 |
