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Name : secD (F382_11680) Accession : YP_008235140.1 Strain : Mannheimia haemolytica D153 Genome accession: NC_021743 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2292399 - 2294207 bp Length : 1809 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : ATGGTGATCTTCGTGATCGCCATTGGTGCTTTATATGCCCTTCCAAATTTATATGGCGATGATCCTTCGGTACAAATTTC CGGTACTCGTGGGCAACAAGCCACACCTGAGACACTGTCTCAAGTGCAATCCACACTTTCAGCAATGAATATTCAGCCGA AATCTGCCGTGTTAGAAAATGGCTCGATTTTGGTTCGTCTCGAAAGCAGCGAACAGCAATTGCCTGCCAAAGAAAAAATC TCAGAAGCATTGGGGAATAACTACTCTGTTGCCTTAAACCTTGCACCAGCAACGCCACAGTGGTTGTCTGACATTGGCGG TAGCCCGATGAAGCGAGGCTTGGACTTGCTTGGCGGTGTTCGTTTCTTAATGGAAGTGGATATGAACACGGCGCTTGCAA AACAACAAGACACTTTGCAAGACAGCCTGCGTAGTGATTTCCGTAAAGAAAAATTGCAATATCAAGCGGTCAAAAAAGGC GAAAATTTTGCAACTGAGGTTGAATTTGCCGATAACGATACCGCCGAAAAAGCAGTGCGTTTAGTGCGTCTCTCTCACCC AACGCTTGATATTTTGGTAAATGATAATAAAGTCACCTTAACGCCATCAGCACAAGCTCTTTCTGAATCTCGCACGATGG CAATCGAACAAAACCTTTCTATTTTGCGTAAACGTGTTGAGGAATTGGGCGTTTCTGAGCCGACCATTCAGCGTCAAGGT GCAGATCGTATCGTAGTTGAATTACCGGGTGTGCAAGATACCGCTCGTGCCAAAGAGCTTTTAGGGGCAACTGCAACCCT TGAGTTCCGGTTAGTCAATACCGAAGCCAATGTGGCCTCTGCGGCGAAAGGCATTGTGCCGGCTGATTCAGGACTGCAAA ACACCCGTGATGGCGAGCCAGTTGTATTACGCCGTAAACCTTCGTTAGGGGGTGAACATATTATTGATGCAACCTCAGGC ACTGATGAGCGTGGCTTGCCGCAAGTGAGTATCCGACTCGATACCGAAGGCGGCGAGATGATGGGTGAAATTACTAAAAT GGCAATCCAAAAACCGATGGCAACACTTTATACCGAATTTAAAGATTCAGGTCGTAAAGATGCTAACGGTAAAGTCATTT TAGAAAAACACCAAGAGGTAATTAACGTTGCAACCATTCAAACCCGTTTAGGTAATCAATTCCAGATTACAGGGATTAAT TCACCAGCGGAAGCTCAAAACCTTGCGGTATTATTACGTTCAGGTGCGTTGATTGCTCCAATCGTGATTGTGGAAGAGCG TACTATCGGTGCTTCTCTTGGGGCAGATAATGTTAAACAAGGTATGGAAGCTAGTATTTTAGGCTTAGGCTTAACGATCC TGTTCTGTCTAGCCTTTTATAAAGTATTTGGTATATTTGCCTCTCTTGCCTTGATTGTGAATATGATCTTAACGATTGGT TTAATGTCATTAATCGGTGCAACCCTTACTATGCCGGGAATTGCCGGTATCGTACTTGCTGTGGGTATGTCAGTTGATGC CAACGTACTAATCTACGAGCGGATCAAAGAAGAGATTCGTAACGGTCGCCCAATTCAACAAGCAATCCACGAAGGTTATA ATGGCGCATTCTCAAGTATTTTTGACTCCAACCTCACCACTATTTTGACTTCTCTTGTGCTTTATGGTGTAGGTACAGGT CCGGTAAAAGGCTTTGCGGTAACGCTTGCATTAGGGGTAATTATTTCTATGTTTACCGCAATTACAGGTACTCGAATGCT TGTAAACTGGGTTTACGGTGGCAAACGCGTGAAGAAACTTTGGATTTAA Protein sequence : MVIFVIAIGALYALPNLYGDDPSVQISGTRGQQATPETLSQVQSTLSAMNIQPKSAVLENGSILVRLESSEQQLPAKEKI SEALGNNYSVALNLAPATPQWLSDIGGSPMKRGLDLLGGVRFLMEVDMNTALAKQQDTLQDSLRSDFRKEKLQYQAVKKG ENFATEVEFADNDTAEKAVRLVRLSHPTLDILVNDNKVTLTPSAQALSESRTMAIEQNLSILRKRVEELGVSEPTIQRQG ADRIVVELPGVQDTARAKELLGATATLEFRLVNTEANVASAAKGIVPADSGLQNTRDGEPVVLRRKPSLGGEHIIDATSG TDERGLPQVSIRLDTEGGEMMGEITKMAIQKPMATLYTEFKDSGRKDANGKVILEKHQEVINVATIQTRLGNQFQITGIN SPAEAQNLAVLLRSGALIAPIVIVEERTIGASLGADNVKQGMEASILGLGLTILFCLAFYKVFGIFASLALIVNMILTIG LMSLIGATLTMPGIAGIVLAVGMSVDANVLIYERIKEEIRNGRPIQQAIHEGYNGAFSSIFDSNLTTILTSLVLYGVGTG PVKGFAVTLALGVIISMFTAITGTRMLVNWVYGGKRVKKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 6e-120 | 45 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 45 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-119 | 45 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 6e-120 | 45 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 6e-120 | 45 |
