Gene Information

Name : SEEH1578_20535 (SEEH1578_20535)
Accession : YP_008248160.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : heme ABC transporter membrane protein CcmC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4147700 - 4148437 bp
Length : 738 bp
Strand : -
Note : COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component

DNA sequence :
ATGTGGAAAACCCTTCATCAGCTGGCGGCGCCGCCCCGGCTGTATCAGATTTGCGGCAGGCTCGTGCCGTGGCTGGCGGC
GGCCGGCATCATCGCGCTGGCCACCGGCTGGGTCCGGGGCTTTGGTTTCGCCCCGGCGGACTACCAGCAGGGGGAGGGCT
ACCGCATTATGTACCTGCATGTCCCGGCGGCCATCTGGTCGATGGGTATCTATGCGGCGATGGCGGTGGCGGCGTTCACC
GGGCTGGTCTGGCAGATGAAAATGGCCAGCCTTGCCGTCGCGGCGATGGCGCCGGTGGGGGCGGTGTACACCTTCATCGC
GCTGGTCACCGGCGCGGCGTGGGGCAAACCGATGTGGGGCACCTGGTGGGTGTGGGACGCGCGCCTGACCTCGGAGCTGG
TGCTGCTGTTTCTCTACGCCGGGGTCATCGCCCTGTGGCACGCCTTTGACGACCGTAAAATGGCCGGGCGCGCGGCGGGC
ATTCTGGTGCTGGTCGGCGTGGTGAACCTGCCGGTTATCCACTATTCCGTCGAGTGGTGGAACACCCTGCACCAGGGCTC
GACGCGGATGCAGCAGAGTATCGACCCGGCGATGCGCTCGCCGCTGCGCTGGGCCATCGCCGGCTACCTGCTGCTCTTTA
TGACGCTTTCGCTGATGCGGATGCGCAACCTGATTTTACTGATGGAAAAACGCCGCCCGTGGGTGAGCGAACTGATACTG
AAAAGGGGGCACCGGTGA

Protein sequence :
MWKTLHQLAAPPRLYQICGRLVPWLAAAGIIALATGWVRGFGFAPADYQQGEGYRIMYLHVPAAIWSMGIYAAMAVAAFT
GLVWQMKMASLAVAAMAPVGAVYTFIALVTGAAWGKPMWGTWWVWDARLTSELVLLFLYAGVIALWHAFDDRKMAGRAAG
ILVLVGVVNLPVIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWAIAGYLLLFMTLSLMRMRNLILLMEKRRPWVSELIL
KRGHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 1e-39 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_20535 YP_008248160.1 heme ABC transporter membrane protein CcmC VFG1856 Protein 6e-42 49