Gene Information

Name : SEEH1578_21645 (SEEH1578_21645)
Accession : YP_008248380.1
Strain : Salmonella enterica 41578
Genome accession: NC_021810
Putative virulence/resistance : Virulence
Product : carboxysome structural protein EutM
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4380967 - 4381257 bp
Length : 291 bp
Strand : -
Note : COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein

DNA sequence : 
ATGGAAGCATTAGGAATGATTGAAACCCGGGGCCTGGTTGCGCTGATTGAGGCCTCAGATGCGATGGTAAAAGCCGCACG
CGTGAAGCTGGTCGGCGTGAAGCAGATTGGCGGTGGCCTGTGTACGGCCATGGTGCGTGGCGACGTGGCGGCGTGCAAAG
CCGCAACCGATGCTGGCGCCGCTGCGGCGCAGCGCATTGGCGAGCTGGTCTCTGTACACGTGATTCCACGCCCGCACGGC
GATCTGGAAGAAGTGTTCCCGATCAGCTTCAAAGGCGACAGCAACATTTGA

Protein sequence : 
MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHG
DLEEVFPISFKGDSNI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 3e-14 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 4e-14 58
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SEEH1578_21645 YP_008248380.1 carboxysome structural protein EutM VFG1596 Protein 1e-14 62
SEEH1578_21645 YP_008248380.1 carboxysome structural protein EutM VFG1597 Protein 2e-14 58
SEEH1578_21645 YP_008248380.1 carboxysome structural protein EutM VFG1598 Protein 7e-13 56