Gene Information

Name : LM1816_08328 (LM1816_08328)
Accession : YP_008288352.1
Strain : Listeria monocytogenes J1816
Genome accession: NC_021829
Putative virulence/resistance : Virulence
Product : carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2888630 - 2888914 bp
Length : 285 bp
Strand : -
Note : ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGCAAACGCAAACGCATTAGGTATGATCGAAACTAAAGGTTTAGTAGGAGCAGTAGAAGCAGCAGACGCAATGGTGAA
AGCAGCTAACGTAACACTTATGGGTAAAGAACAAGTTGGTGGCGGTCTAGTAACAGTTATGGTTCGCGGCGATGTTGGCG
CAGTTAAAGCAGCAACAGATGCAGGCGCAGCAGCAGCAGAACGCGTTGGTGAATTACTATCTGTACACGTAATCCCACGT
CCACACAGCGAAGTAGACGCAATTCTACCAAAAAGCGCTGAATAA

Protein sequence : 
MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLVTVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPR
PHSEVDAILPKSAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 1e-08 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 9e-09 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-08 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM1816_08328 YP_008288352.1 carboxysome shell protein VFG1596 Protein 6e-09 64
LM1816_08328 YP_008288352.1 carboxysome shell protein VFG1597 Protein 4e-09 61
LM1816_08328 YP_008288352.1 carboxysome shell protein VFG1598 Protein 8e-09 57