Gene Information

Name : LM220_05332 (LM220_05332)
Accession : YP_008288604.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Resistance
Product : macrolide ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 202856 - 203530 bp
Length : 675 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
TTGATACAACTATTTAATATTTCCAAATCCTATCAAATGGGTGAATGCACCATAAAGGCTCTAGATAATGTATCATTGCA
AATTGATCAAGGGGAATTTCTGGCCATTATCGGACCGTCTGGCTCTGGAAAATCTACTTTAATGAACATCCTCGGTATAC
TTGACAGAGCAACGATAGGAGAATACTACCTCAATAAAACGAATTTAATGCGAATATCAGATAAGAAAATTTCTCGAATA
AGGAATAGGAAAATTGGTTTTATTTTTCAACAATTTAATTTAATGCCACGACTTACTGCTTTTGAAAATGTAGAATTGCC
ATTAGTATATCGAGGTGTGGGCAAAGCTACTCGAAAAAAAGTAGTATTAAAAAGTTTAGAACGTGTCGGACTATTAGATA
AAGAAAAACATATACCAGCCCAGCTTTCAGGAGGACAGCAGCAACGGATTGCAATAGCTCGAGCCATCGCTGGAAGTCCA
GAATTAATATTAGCAGATGAACCTACTGGCGCGCTAGACTCTAAAACTGGAGAAGAAGTAATGACTTTGCTAAGAGAAAT
TCATAGAGAAGGAAATACATTAATCATGATTACCCACGACAAAGAAATTGCAAATCAAGCAGAACGAATAATAGAAATAA
AAGACGGAAAACTCCGTGAATGGAACAAATTATGA

Protein sequence : 
MIQLFNISKSYQMGECTIKALDNVSLQIDQGEFLAIIGPSGSGKSTLMNILGILDRATIGEYYLNKTNLMRISDKKISRI
RNRKIGFIFQQFNLMPRLTAFENVELPLVYRGVGKATRKKVVLKSLERVGLLDKEKHIPAQLSGGQQQRIAIARAIAGSP
ELILADEPTGALDSKTGEEVMTLLREIHREGNTLIMITHDKEIANQAERIIEIKDGKLREWNKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM220_05332 YP_008288604.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-50 52
LM220_05332 YP_008288604.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 3e-24 47
LM220_05332 YP_008288604.1 macrolide ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-38 47
LM220_05332 YP_008288604.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-32 46
LM220_05332 YP_008288604.1 macrolide ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-34 45
LM220_05332 YP_008288604.1 macrolide ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 8e-26 42