Gene Information

Name : LM220_17002 (LM220_17002)
Accession : YP_008289332.1
Strain : Listeria monocytogenes J1-220
Genome accession: NC_021830
Putative virulence/resistance : Virulence
Product : carboxysome shell protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 927987 - 928274 bp
Length : 288 bp
Strand : +
Note : ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGCAAGAAGCACTAGGCTTAGTTGAAACTAAAGGGCTAGTCGGCGCCATTGAAGCCGCTGACGCCATGGTTAAATCAGC
TAATGTAACATTAACAGGGTACGAAAAAATCGGGTCTGGACTGGTTACTGTCATGGTTCGTGGCGATGTTGGTGCGGTGA
AAGCAGCGACAGAAGCAGGAGCGGCAGCAGCAAGAAATGTAGGTACCGTGATGAGTACACATGTTATTCCTCGTCCGCAT
ACTGATGTGGAAGAAATTTTACCAGTGAGGGTGAAGTCAGATGAGTGA

Protein sequence : 
MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTVMVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPH
TDVEEILPVRVKSDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 5e-17 67
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 7e-16 64
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 7e-16 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LM220_17002 YP_008289332.1 carboxysome shell protein VFG1596 Protein 2e-17 67
LM220_17002 YP_008289332.1 carboxysome shell protein VFG1598 Protein 3e-16 64
LM220_17002 YP_008289332.1 carboxysome shell protein VFG1597 Protein 3e-16 62