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Name : secD (SEEB0189_17260) Accession : YP_008309746.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 3517900 - 3519747 bp Length : 1848 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGTTAAACCGTTATCCTTTGTGGAAGTACATCATGCTGGTCGTCGTGATTATCGTCGGCCTGCTTTACGCACTTCCCAA CCTGTATGGTGAGGATCCGGCTGTTCAAATCACTGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCC AGAAAACGTTACAAGAAGAAAAAATTCCCGCTAAGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACC ACCGATACCCAGCTACGCGCCCGTGAAGCGCTGATGAGCGTGCTGGGGGATAAATATGTCGTGGCGCTTAACCTTGCGCC GGCTACGCCGCGCTGGTTGGCGGCTATTCACGCCGATCCGATGAAGCTCGGTCTTGATCTGCGCGGCGGCGTTCACTTCC TGATGGAAGTGGATATGGATACCGCGTTAGGTAAACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGATCTGCGTGAA AAAGGCATTCCTTATACCACCGTTCGTAAAGAAAATAATTATGGGTTGAGCATCACGTTCCGTGACAGCAAAGCGCGTGA TGAGGCGATCGCCTATCTGACGCCGCGTCATCGTGACCTGGTGATTTCCAGCCAGGGCGGTAATCAACTTCGCGCGGTAA TGACCGATGCGCGCCTGAGCGAAGCGCGCGAATACGCCGTTCAGCAGAACATTAATATTCTGCGTAACCGTGTTAACCAA CTGGGCGTCGCGGAGCCTGTCGTACAACGCCAGGGCGCAGACCGTATTGTGGTTGAGCTGCCGGGTATCCAGGATACCGC TCGCGCGAAAGAAATTCTCGGCGCGACCGCGACGCTGGAATTCCGTCTGGTGAATACCAACGTTGACCAGGCCGCCGCCG CTGCCGGGCGCGTACCGGGCGATTCCGAAGTGAAACAGACCCGCGAAGGTCAGCCGGTGGTATTGTACAAACGCGTGATC CTCACCGGCGACCATATCACCGACTCGACGTCCAGCCAGGATGAATATAACCAACCGCAGGTTAACATCTCGCTGGATAG CGCAGGCGGCAATATCATGTCTAACTTCACTAAGGACAATATCGGCAAACCGATGGCGACCCTGTTTGTGGAGTATAAAG ACAGCGGTAAGAAAGACGCTAACGGTCGCGCCGTACTGGTGAAACAGGAAGAGGTGATTAACATTGCCAACATCCAGTCT CGGCTGGGTAACAGCTTCCGTATTACCGGTATCAGCAACCCGAACGAAGCGCGTCAGCTCTCGTTGCTGCTGCGTGCGGG CGCCCTGATTGCGCCGATTCAGATCGTTGAAGAGCGCACCATTGGCCCGACTTTGGGTATGCAAAATATTAAGCAGGGCC TGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCCATCCTGTTCATGATCTTCTTCTATAAGAAGTTTGGTCTGATTGCGACC AGCGCGTTAGTGGCTAACCTGGTGTTGATTGTCGGTATCATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCGGGGAT TGCGGGTATCGTGTTAACCCTTGCGGTGGCGGTCGACGCCAACGTTCTGATTAACGAACGTATCAAAGAAGAGTTGAGTA ATGGCCGCACGGTACAGCAGGCGATAAACGAAGGCTATGCCGGCGCGTTCAGTTCCATCTTCGATGCGAACATCACGACG CTGATTAAAGTCATCATTCTGTATGCTGTCGGTACCGGGGCAATTAAAGGGTTCGCGATTACGACCGGTATCGGTGTGGC GACGTCGATGTTTACCGCGATTATCGGTACGCGTGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGT CAATCTGA Protein sequence : MLNRYPLWKYIMLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDT TDTQLRAREALMSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE KGIPYTTVRKENNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQGGNQLRAVMTDARLSEAREYAVQQNINILRNRVNQ LGVAEPVVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVI LTGDHITDSTSSQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQS RLGNSFRITGISNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIAT SALVANLVLIVGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITT LIKVIILYAVGTGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-120 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-120 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-120 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-120 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-120 | 48 |
