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Name : SEEB0189_17780 (SEEB0189_17780) Accession : YP_008309847.1 Strain : Salmonella enterica CFSAN000189 Genome accession: NC_021844 Putative virulence/resistance : Unknown Product : fimbrial protein TcfD Function : - COG functional category : - COG ID : - EC number : - Position : 3634877 - 3635983 bp Length : 1107 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGAGTAATAAAATGAAGTGGACGAGTATGACAGCCCATTGGTCAGCAATTATTAATTTCATCCGAAAATACGTTCGCTC TGCAAGGATGGTTGCAATTCATCTTCTGGTACTGTGGTTACCTGTTTCAGCTCAGGCTGAAAGGGAGAGCGACTATTCAT GGAACCTGCCAGTCTCTGGGAATATAGACCTGAATGCACTCCCTGAACAACAGGATATATGGTCTATTAAGGTAGTCCAA AGGGATTTCGGTCTAGGGTACTTTTCATTAATGTGCCTGTCTGAAAACGATGATGTTTTCGGAAAATGCCGGACAAGGGT TCCAGACGGTGTGTATGTTCAACCTTTCCAAAACGTGCCATTACGGTTTACGCGGCAGGGTAGTGGTGAGACGATTACCC TGACCGTGGCAGGTAGGTTTGCTAATCATGATGAGGGATTTGCAGGATCGGTTACCTACAGAGCAATGGAGGATCACGTC ATTATAAAAACATGGATTCTGCGTGAGGAGTTGAAAAAAATCCCGACTACCGGCATCTGGACTGCGCATCTGCAGATGCG ATCTTTGCGATGGTGGAATATTCCAATCGGTAGTTTAGTGTCGGATATCACGCTGAATGTAACAGACCACTTTGCTGAAA ATGCGGCTATTTACTTTCCGCAATTTGGTACAGCAACGCCCCGGGTGGACCTGAATCTTCACCGGATGAATGCCTCACAA ATGTCGGGCAGGGCTAATCTGGATATGTGTCTGTATGACGGAGGTGTGAAAGCCCGTTCATTACAGATGAAGATAGAAGG AAGCAATAAGTCAGGTACGGGATTTCAGGTTATGAAGAGCGATTCTGCTGATACGATTGATTATGCGGTCAGTATGAATT ATGGGGGACGAAATATTCCTGTCACCCGTGGCGTGGAGTTCAGTCTGGATAACGTGGATAAAGCAGCAACGCGTCCGGTG GTACTTCCCGGGCAACGGCAGGCGGTACGTTGTGTGCCAGTGCCCCTTACCCTGACAACACAACCCTTTAACATCAGAGA GAAGCGTTCTGGTGAGTATCAGGGAACGCTGACAGTGACAATGCTGATGGGAACACAAACCCCCTGA Protein sequence : MSNKMKWTSMTAHWSAIINFIRKYVRSARMVAIHLLVLWLPVSAQAERESDYSWNLPVSGNIDLNALPEQQDIWSIKVVQ RDFGLGYFSLMCLSENDDVFGKCRTRVPDGVYVQPFQNVPLRFTRQGSGETITLTVAGRFANHDEGFAGSVTYRAMEDHV IIKTWILREELKKIPTTGIWTAHLQMRSLRWWNIPIGSLVSDITLNVTDHFAENAAIYFPQFGTATPRVDLNLHRMNASQ MSGRANLDMCLYDGGVKARSLQMKIEGSNKSGTGFQVMKSDSADTIDYAVSMNYGGRNIPVTRGVEFSLDNVDKAATRPV VLPGQRQAVRCVPVPLTLTTQPFNIREKRSGEYQGTLTVTMLMGTQTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcfD | NP_454915.1 | putative fimbrail protein | Not tested | SPI-6 | Protein | 5e-90 | 64 |
