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Name : lysS (STAIW_v1c00180) Accession : YP_008311012.1 Strain : Spiroplasma taiwanense CT-1 Genome accession: NC_021846 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 19792 - 21303 bp Length : 1512 bp Strand : + Note : - DNA sequence : ATGAAAGATATTTTTGAAAGAAATTTCTCAGAGCAGGAATTAGTCAGAAGAAAAAAATTAGAAAAATTAATTGAAAAAAA TAGAAACCCATTTATTGAAAATAGTTTTGAAAAAAATTATACAATTTCTGAACTTTTTGAAAAATTTAATAATTTTTCAA AAGAAGAATTAAATTTAAAAGATAATGAAAATATTTTAATAGCAGGAAGAATTAGATTATTTAGAGAAGCTGGAAAAAAA GCTATTTTTGCAAATATTCAAGATCAAAATTCAATAATTCAAATTTATATTAGACAAGATGAAATTGGAGAAGAAGAATT TGAATACTTTAGAGATTTAGATTTAGGAGATATAATAGGAATTACAGGAACTATGATGAAAACAGATCATGGCGAATTAA CAGTAAGAATAAAAAAATATATTTTATTAACAAAAGCATTAAAACCACTTCCAGATAAACACGCAGGAATTGTAGATGTA GAAGAAAAATATAGAAGAAGATATGTAGATCTTATTATGAATCCAGAGACAAAAAAAATTTTTATAGGAAGAAATAAAAT TATAAGAACAATTCAAACATATTTGGATAACAAAGGTTATATGGAAGTTGAGACTCCTATATTACAATCTCTTAGAGGAG GAGCAGCAGCAAAACCATTTATAACACATTATAATGCTCTAGATAATGATTTTTATTTAAGAATTGCAACAGAATTACAT CTAAAAAGATGTATTGTTGGTGGTTTTGAAGGAGTATATGAAATTGGAAGACTTTTTAGAAATGAAGGAATAAGTACTAG ACATAATCCAGAATTTACTTCAATTGAAATTTATGTTGCCTATAAAAATATGATTTTCTTAATGGATTTATGTGAAGAAC TATTTAGGAAATGTTCTTTGGAAGTTAGAAATACAACAAAAATTAATTATGGTGGTTTTGAATTAGATTTATCAAAACCT TTTAAAAGATGACACATGGTGGATGCAATAAAAGAAGTTTGTAATGTTGATTTTTGAAAAAAAATGACATATCAAGAAGC TTTAAAAATTGCAAAGAAACATAACATAAACGTTGAAAAACATCATTTCTCTGTAGGCCATATAATAAATTTATTTTTTG AAGAATTTGTAGAACAAAAAATTATTGAACCAACTTTTATTTGAGGACATCCAAGAGAAATTTCTCCTCTTTCAAAATTA AATTCAGAGGATTCAAGATTCACTGATAGATTTGAATTGTTTATAATTAAACGTGAATATGCGAATGCTTTTGCTGAATT AAATAACCCTATAGAACAATTTGATAGATTTGTAGATCAAATTAAAGAAGCAGAAGCTGGTAATGATGAAGCTACAGATA TGGATATTGATTTTATTGAAGCATTAGAATACGGAATGCCTCCAACTGGAGGAATAGGAATAGGAATAGATAGATTAGTT ATGTTACTAACTAATTCAGAATCAATTAAAGATGTTTTGCTGTTTCCACAAATGAAACCAAGAGGCAAATAA Protein sequence : MKDIFERNFSEQELVRRKKLEKLIEKNRNPFIENSFEKNYTISELFEKFNNFSKEELNLKDNENILIAGRIRLFREAGKK AIFANIQDQNSIIQIYIRQDEIGEEEFEYFRDLDLGDIIGITGTMMKTDHGELTVRIKKYILLTKALKPLPDKHAGIVDV EEKYRRRYVDLIMNPETKKIFIGRNKIIRTIQTYLDNKGYMEVETPILQSLRGGAAAKPFITHYNALDNDFYLRIATELH LKRCIVGGFEGVYEIGRLFRNEGISTRHNPEFTSIEIYVAYKNMIFLMDLCEELFRKCSLEVRNTTKINYGGFELDLSKP FKRWHMVDAIKEVCNVDFWKKMTYQEALKIAKKHNINVEKHHFSVGHIINLFFEEFVEQKIIEPTFIWGHPREISPLSKL NSEDSRFTDRFELFIIKREYANAFAELNNPIEQFDRFVDQIKEAEAGNDEATDMDIDFIEALEYGMPPTGGIGIGIDRLV MLLTNSESIKDVLLFPQMKPRGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-94 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008311012.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-94 | 48 |
