|
Name : secD (M636_18865) Accession : YP_008317086.1 Strain : Genome accession: NC_021848 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 2285636 - 2287492 bp Length : 1857 bp Strand : - Note : part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of DNA sequence : GTGCTAAACCGTTACCCATTATGGAAGTACTTGATGGTGTTTTTTGCCATCATCACCGCTGCATTGTATGCACTTCCAAA TATCTACGGTGAAGATCCGGCTATTCAAGTTACAGGGGCGCGTGGCGCCTCTGTAGATATGTCAACGCTGGATGCTGTCA CCACTGCTCTTGATAAAGAGCATCTCTCTCATAAATCCATTGCTCTCGAGAATGGATCAATTCTTGTTCGTTTCAACGAC ACTGATACTCAAATTAGTGCTCGTGATGTCATCAGCGAAGCGCTTGGCAAAGACAAAATTGTTGCACTTAACCTTGCTCC TTCTACTCCAGATTGGCTAGAAGCAATTGGTGCGTCGCCACTTAAACTAGGTCTTGACCTACGTGGTGGTGTTCACTTCT TGATGGAAGTGGATATGGACGCAGCAATGGAAAAGCTTGTTGGTCAACAAGAGGAAGCTTTCCGTAGTGAACTTCGTGAC GCTAAGATTCGTTACCGTGCAATCCGTCCTTCTGGCAAAGAAGGGGTGGAAGTGCTGCTACGTGACGAAGAGCAACTGGC TGAAGCGAAGCGCACGCTAACGAAGAATCATCCTGACATGAACTTTGTCGAGTCTGATTCGAATGGTCGTTACGCTCTTA TCGCCACTTTTACTGAGCAACGTTTGCAAGAGATTCGTAACTACGCTGTAGAACAAAACATCACGATTCTACGTAACCGT GTAAATGAGCTGGGTGTTGCTGAGCCGCTTGTGCAACGTCAAGGCGCTAGCCGCATCGTTGTTGAGCTGCCAGGTGTTCA AGACACTGCTCGTGCGAAAGAAATTCTCGGTGCCACGGCAACCCTTGAATTCCGTGAAGTTGATGATAAAGCTGATTTAG CAGCGGCGGCGAATGGCCGTGCACCTGCGGGCAGTGAAATCAAACAAGATCGCGATGGTCGTCCTGTTGTACTTAAAAAG CGTGTCATCCTAAGCGGCGCTAGCATCACGGATGCAAGTTCTAGTGTGGATGAATACGGTCGCCCTCAAGTTAACATCTC GCTAGACAGCGAGGGTGGTAACAAGATGTCGGCGTTCTCGAAGAAAAACATTGGTAAGTTAATGGCTACCGTGTTTGCTG AGTACAAAGACAGCGGTCGTAAAACGCCTGAAGGCAAAGTTATCCTGACTAAGCACGAAGAAGTGATTAACCAAGCAACG ATTCAATCTGCACTTGGCCGTAACTTCCGTATTACAGGTATCGACTCTGCTGCTGAAGCGCACAACCTCGCACTTCTATT ACGTGCAGGTGCACTTATCGCACCGATCTCTATCGTTGAAGAACGTACCATTGGTCCGTCAATGGGTCAGCAAAACATCG ACATGGGTATCCAAGCGTGTGTTTGGGGTATGGTAGCTGTAATGCTATTTACTCTGCTTTACTACCGCGGCTTTGGTCTG ATTGCCAATATTGCGTTGATGGCTAACTTAGTGTTGATCATTGGTGTGATGTCGATGATTCCAGGGGCAACGATGACGCT GCCAGGTATTGCCGGTATCGTATTGACTGTGGGTATGGCCGTCGATGCTAACGTACTGATCTTTGAACGTATCCGTGAAG AGCTGCGAGATGGACGTAGTCCACAACAAGCGATTCACCAAGGTTACGCCAACGCATTTAGTACCATTGCCGATGCGAAC ATCACGACGCTTATCACTGCAATCATTCTGTTTGCTGTTGGTACAGGTGCAGTGAAAGGTTTCGCAGTTACTCTATCTAT CGGTATCTTAACTTCAATGTTCACCGCCATCATTGGTACACGTTGTATCGTGAACCTACTGTACGGTGGCAAACGCGTTG ATAAATTGTCGATCTAA Protein sequence : MLNRYPLWKYLMVFFAIITAALYALPNIYGEDPAIQVTGARGASVDMSTLDAVTTALDKEHLSHKSIALENGSILVRFND TDTQISARDVISEALGKDKIVALNLAPSTPDWLEAIGASPLKLGLDLRGGVHFLMEVDMDAAMEKLVGQQEEAFRSELRD AKIRYRAIRPSGKEGVEVLLRDEEQLAEAKRTLTKNHPDMNFVESDSNGRYALIATFTEQRLQEIRNYAVEQNITILRNR VNELGVAEPLVQRQGASRIVVELPGVQDTARAKEILGATATLEFREVDDKADLAAAANGRAPAGSEIKQDRDGRPVVLKK RVILSGASITDASSSVDEYGRPQVNISLDSEGGNKMSAFSKKNIGKLMATVFAEYKDSGRKTPEGKVILTKHEEVINQAT IQSALGRNFRITGIDSAAEAHNLALLLRAGALIAPISIVEERTIGPSMGQQNIDMGIQACVWGMVAVMLFTLLYYRGFGL IANIALMANLVLIIGVMSMIPGATMTLPGIAGIVLTVGMAVDANVLIFERIREELRDGRSPQQAIHQGYANAFSTIADAN ITTLITAIILFAVGTGAVKGFAVTLSIGILTSMFTAIIGTRCIVNLLYGGKRVDKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 49 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 49 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 49 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 2e-118 | 49 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 4e-119 | 49 |
