|
Name : A464_3884 (A464_3884) Accession : YP_008324478.1 Strain : Salmonella bongori N268-08 Genome accession: NC_021870 Putative virulence/resistance : Unknown Product : Cytochrome c heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 3866178 - 3868109 bp Length : 1932 bp Strand : - Note : - DNA sequence : ATGATGCCTGAAGCTGGCAACGGGCTGCTGTGCCTGGCGCTCGGGGTGGCGTTACTGCTGTCCGTGTATCCGTTATGGGG CGTGGCGCGCGGCGATGCGCGCATGATGGCGTCAGCCAGGCTGTTTTCCTGGCTGCTGTTTCTTTGTGTGGCGGGCGCGT TTGCCGTGCTGGTACACGCCTTTGTGGTTAACGACTTCACGGTGCTCTACGTCGCCAGCAACTCGAACACGCAGCTTCCT GTCTGGTACCGGGTGGCCGCCACCTGGGGGGCGCACGAAGGTTCGCTGCTGTTATGGGTCTTGCTGATGAGCGGCTGGAC GTTTGCGGTGGCGTTGTTCAGCAAGTCCATGCCGCCGGATATTGTGGCCCGCGTACTGGCGGTGATGGGGATGGTGAGCG CCGGGTTTCTGCTGTTCATCCTCTTTACCTCCAGCCCGTTCGCCCGCACGTTGCCGGACTTTCCGGTGGAAGGGCGCGAT CTGAATCCGCTGTTGCAGGATCCGGGGCTGATTTTCCATCCGCCGCTGCTGTATATGGGCTATGTCGGCTTCTCGGTGGC CTTTGCCTTTGCCATTGCCGCGTTGCTGAGCGGGCGGCTGGACAGCACCTTTGCCCGTTTCTCGCGTCCCTGGACGCTGG CGGCGTGGATTTTCCTGACGCTGGGTATCGTGCTCGGCTCCGCATGGGCCTATTACGAGCTCGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTTGAAAACGCCTCCTTTATGCCGTGGCTGGCAGGCACCGCGCTGATACACTCGCTGGCGGTCACCGA ACAGCGCGCCAGCTTTAAGGCGTGGACGCTGCTGCTGGCCATCTGCGCCTTCTCGCTCTGTCTGCTGGGCACCTTCCTGG TGCGCTCGGGCGTGCTGGTGTCGGTCCACGCCTTCGCCTCCGACCCGTCGCGCGGCATGTTCATCCTCGCCTTTATGGTG CTGGTGACAGGCGGTTCGCTGCTGCTGTTCGCCGCGCGCGGACATAAGGTGCGTTCCCGGGTAAACAATGCCCTGTGGTC GCGGGAGTCGCTGCTGCTGGCTAATAACGTGCTGCTGATGGCCGCCATGCTGGTGGTGCTGCTGGGCACGCTGCTGCCGC TGGTACACAAACAGCTGGGGCTGGGCAGCATTTCGATTGGCGAACCGTTTTTCAATACCATGTTCACCTGGCTGATGGCG CCGTTTGCCCTGCTGTTAGGGATTGGGCCTTTGGTGCGCTGGGGCCGTGACAGGCCACGTAAAATCAGAACGCTGCTGCT GGCTGCCGTTGTCACTACCCTGGCGCTGTCGGTACTTTTGCCATGGCTACTGGAAGATAACATCATCGCCATGACGGCAG TGGGGATGGCGATGGCCTGCTGGATTATTGTGCTGGCGGTGGCCGAAGCCGTACAGCGCCTGTCCCGCGGCACGAAAACG CCCCTCAGCTACTGGGGGATGGTGGCGGCGCACCTCGGGCTGGCGGTGACGATTACCGGCATCGCCTTCAGCCAGAATTA CAGCGTGGAGCGCGACGTGCGGATGCGGGCGGGCGACAGCGTGGATATCCACCACTACCGGTTCACCTTCCGGGAGGTGC GGGACATCACCGGGCCCAACTACCGCGGCGGGGTGGCCATTATCGGGGTGACGCGCGACGGGGAGCCGGAGGCGGTGCTC CATGCGGAGAAACGCCTCTACAACACCAGCCGGATGGTGATGACCGAGGCGGCGATTGACGGCGGGCTGACCCGCGACCT GTACGCCGCGCTCGGCGAGGAGCTGGATAACGGCGCATGGGCCGTACGCCTGTATTACAAACCGTTTGTCCGCTGGATTT GGGCTGGTGGCATACTGATGGCGCTGGGCGGGCTGCTGTGCCTGGCGGACCCGCGCTACCGCCGCCGTAAACCGTCGCCG GAGGCCGTATGA Protein sequence : MMPEAGNGLLCLALGVALLLSVYPLWGVARGDARMMASARLFSWLLFLCVAGAFAVLVHAFVVNDFTVLYVASNSNTQLP VWYRVAATWGAHEGSLLLWVLLMSGWTFAVALFSKSMPPDIVARVLAVMGMVSAGFLLFILFTSSPFARTLPDFPVEGRD LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSTFARFSRPWTLAAWIFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALIHSLAVTEQRASFKAWTLLLAICAFSLCLLGTFLVRSGVLVSVHAFASDPSRGMFILAFMV LVTGGSLLLFAARGHKVRSRVNNALWSRESLLLANNVLLMAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFNTMFTWLMA PFALLLGIGPLVRWGRDRPRKIRTLLLAAVVTTLALSVLLPWLLEDNIIAMTAVGMAMACWIIVLAVAEAVQRLSRGTKT PLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRAGDSVDIHHYRFTFREVRDITGPNYRGGVAIIGVTRDGEPEAVL HAEKRLYNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGILMALGGLLCLADPRYRRRKPSP EAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 93 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-123 | 56 |
