Gene Information

Name : BDL_4701 (BDL_4701)
Accession : YP_008328480.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Virulence
Product : type III secretion apparatus H+-transporting two-sector ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.14
Position : 1522139 - 1523488 bp
Length : 1350 bp
Strand : -
Note : III_secr_ATP: type III secretion apparatus H+-transporting two-sector ATPase

DNA sequence :
ATGAGCGCGGACGAGCCCTTGCGCACGGCCGAATTCAGCCACCTGGCGGATGCGATCGAGCGGGAAATTCTCGCGGTGTC
GGGTGTCGTGCGCACGGGCCGGGTCCTCGAAGTGATCGGCACGCTGATCAAGGTGTCCGGGCTCGACGTCGCGCTGGGGG
AATTGTGCGAGCTTCGAACGCGCGAAGGCAGGCTGTTGCAACGGGCGGAAGTCGTCGGTTTCACGCGTGATGTGGCGCTG
CTGTCGCCGTTCTCGCAACTCGAGCAGATCTCGCGGACCACCCAGGTGATCGGGCTCGGCCGTCCGTTGTCGATCCCGGT
CGGCGACGCACTGCTCGGCCGCGTGATCGACGGCCTCGGAGAGCCGCTCGACGGCGGTCCGCCGCTTGCGTCGGAAACGC
TGCAGCCGCTGATCGCGGCGCCTCCCGAGCCGATGAGCCGTCGGATGATCGATGCGGCGATGCCGACGGGCGTGCGAGTC
GTCGACGCGATGATGGCGCTCGGGGAGGGCCAGCGCATGGGTATCTTCGCGCCGGCGGGGGTCGGCAAGAGCACGCTGCT
GGGCATGTTCGCGCGCGGCGCCGCGTGCGATGTCAACGTTATCGCGCTGATCGGCGAGCGGGGGCGCGAGGTGCGGGAAT
TCATCGAACTGATTCTCGGGCAGGCGGGCATGGCGCGTTCCGTCGTCGTCTGCGCGACGTCGGATCGTTCGTCAATGGAG
CGGGCGAAGGCGGCCTATGCGGCGACGGCGATCGCCGAATACTTTCGGGACCGCGGCCGACGCGTGCTGTTGATGATGGA
CTCGTTGACGCGCTTCGCGCGAGCCGGGCGCGAAATCGGCCTCGCGGCCGGCGAGCCGCCTGCCAGGCGAGGCTTTCCTC
CGTCGGTCTTCGCCGAATTGCCGCGCTTGCTCGAACGCGCCGGAATGGGGAGGACCGGATCGATCACCGCGCTCTATACC
GTACTCGCGGAAGACGAGAGCGGCAGTGATCCTGTTGCGGAAGAAGTACGCGGCATTCTTGACGGGCACATGATCCTGTC
GCGGGAAGTGGCGGCGAAAAATCAGTATCCGGCGATCGACGTATTGGGGAGCCTGTCCCGCGTGATGCCGCTCGTTGTCG
ACGATGGGCATATGCGAGCGGCGGCGCGGGTTCGGGAATTGTTGGCCAAACATCGGGAGGTGGAGGTCTTGCTGCAGATC
GGGGAGTACAAGGCGGGGGCGAATCCGCTTGCGGACGAGGCGATCGCGAAGGCCGACGCGATTCGATCTTTTTTTTCGCA
ACGAACGGACGATTACGCGGCCGCCGAGGACACCATCGCCAGGCTGTATGCGTTGAGCGGGGCGAACTGA

Protein sequence :
MSADEPLRTAEFSHLADAIEREILAVSGVVRTGRVLEVIGTLIKVSGLDVALGELCELRTREGRLLQRAEVVGFTRDVAL
LSPFSQLEQISRTTQVIGLGRPLSIPVGDALLGRVIDGLGEPLDGGPPLASETLQPLIAAPPEPMSRRMIDAAMPTGVRV
VDAMMALGEGQRMGIFAPAGVGKSTLLGMFARGAACDVNVIALIGERGREVREFIELILGQAGMARSVVVCATSDRSSME
RAKAAYAATAIAEYFRDRGRRVLLMMDSLTRFARAGREIGLAAGEPPARRGFPPSVFAELPRLLERAGMGRTGSITALYT
VLAEDESGSDPVAEEVRGILDGHMILSREVAAKNQYPAIDVLGSLSRVMPLVVDDGHMRAAARVRELLAKHREVEVLLQI
GEYKAGANPLADEAIAKADAIRSFFSQRTDDYAAAEDTIARLYALSGAN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 8e-141 72
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 5e-140 72
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 9e-141 72
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 9e-141 72
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-140 72
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-140 71
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 5e-140 71
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-139 71
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-139 71
lscN AAO18044.1 LscN Virulence TTSS locus Protein 6e-96 58
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-82 52
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 5e-84 51
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 6e-81 50
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 9e-80 50
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 9e-80 50
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-78 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 1e-78 50
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-76 49
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 1e-82 49
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 8e-83 49
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 9e-81 49
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-81 49
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 8e-81 49
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-80 49
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 1e-80 49
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-80 48
escN CAI43874.1 EscN protein Virulence LEE Protein 9e-81 48
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-86 48
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 1e-83 48
unnamed AAL06369.1 EscN Virulence LEE Protein 7e-79 48
escN YP_003236088.1 translocator EscN Virulence LEE Protein 1e-80 47
escN AAC38383.1 EscN Virulence LEE Protein 2e-81 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-81 47
escN AAC31513.1 L0034 Virulence LEE Protein 2e-81 47
escN NP_290268.1 hypothetical protein Virulence LEE Protein 3e-81 47
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 2e-81 47
ECs4568 NP_312595.1 EscN Virulence LEE Protein 3e-81 47
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 7e-82 47
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 3e-82 47
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 1e-81 47
escN AAK26715.1 EscN Virulence LEE Protein 4e-81 46
escN AAL57542.1 EscN Virulence LEE Protein 4e-81 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 3e-81 46
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 3e-69 45
invC AAS66861.1 InvC Not tested SSR-2 Protein 2e-67 44
invC YP_217813.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-73 43
spaI NP_457288.1 secretory apparatus ATP synthase (associated with virulence) Virulence SPI-1 Protein 3e-73 43
spaI NP_806497.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-73 43
invC NP_461815.1 ATP synthase SpaL Virulence SPI-1 Protein 3e-73 43
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 2e-69 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0192 Protein 3e-99 58
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0048 Protein 8e-105 56
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0390 Protein 1e-97 54
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2144 Protein 1e-90 50
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0515 Protein 6e-81 49
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2459 Protein 4e-77 48
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0730 Protein 1e-81 47
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0812 Protein 1e-81 47
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG1008 Protein 9e-69 47
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2331 Protein 6e-71 45
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG1254 Protein 5e-80 44
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG2499 Protein 2e-71 44
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG0555 Protein 1e-73 43
BDL_4701 YP_008328480.1 type III secretion apparatus H+-transporting two-sector ATPase VFG1778 Protein 1e-69 42