Gene Information

Name : hpaR (BDL_3922)
Accession : YP_008327708.1
Strain :
Genome accession: NC_021877
Putative virulence/resistance : Resistance
Product : homoprotocatechuate degradation operon regulator, HpaR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 496513 - 496950 bp
Length : 438 bp
Strand : -
Note : hpaR: homoprotocatechuate degradation operon regulator, HpaR

DNA sequence :
ATGAATCGTACGTTCGATCACCGCAATCTGGCCATGCTGTTGCTCGAGGCCCGCGAAACGTTGATGGGCCGGTTCCGGCC
GATCCTGAAGGAATTTGCGCTGACGGAGCAGCAATGGCGGATCATTCGCGTGCTGGACGGCGAACCGTCTCATGAGCTCG
AAGCCGGGCAGATCGCGAAGCGCTGCTGCATCCTGAGCCCGAGCCTCACGGGCGTGCTGGAGAGAATGGAGCGCGACGGC
CTGATTCGCCGCACGCGCGCGCAGGAGGACCAGCGCAGGCTGATCGTCAGCTTGACGCCGCAAAGTTGCCAGCTCGTCAC
GCAGATCAGCCCGCGCATCGACGAGCAGTATCGGCTCATCGAGCAGCGCTTCGGCGCGGATGCGCTCGGCGAGGTGTACG
CGGCGCTCGACAAACTGATCGACGTCGGCGGCTCGTGA

Protein sequence :
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAKRCCILSPSLTGVLERMERDG
LIRRTRAQEDQRRLIVSLTPQSCQLVTQISPRIDEQYRLIEQRFGADALGEVYAALDKLIDVGGS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpcR AAO17176.1 HpcR Not tested tcd island Protein 8e-27 49

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hpaR YP_008327708.1 homoprotocatechuate degradation operon regulator, HpaR BAC0505 Protein 5e-23 41