Gene Information

Name : A7H1H_1168 (A7H1H_1168)
Accession : YP_008331100.1
Strain : Arcobacter butzleri 7h1h
Genome accession: NC_021878
Putative virulence/resistance : Virulence
Product : type I secretion system ABC transporter, ATP-binding/permease protein, HlyB family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1116019 - 1118160 bp
Length : 2142 bp
Strand : +
Note : Pfam matches to PF00664.18 ABC_membrane, and to PF00005.22 ABC_tran, and to PF03412.10 Peptidase_C39

DNA sequence :
ATGACTAAAAATAAAATAATTGAAAATGAACTAGTACACTCTTTTTTACTTTTAACACGAATGTTAAATTGTGAAATAAG
CTATGATGATTTAATTTTTAAAATAGGTTCATCAAATGAAATAATAGAGGAAGATTTATTATATGTTGCAACTGAATATT
TTGACTTAAAAACTAAAAAAGTTAGTGTAAAGTTAGAAAAATTGAAAAATAATCCACTTCCTGCAATAGTAAAATTAAAA
GATGATAAGTATAGTTTACTTTTTTCTATAGAAAATGATAAATATAAAATATACGATTTTGATAATTCAAAACAAATTCT
TTTAGAAAAAGATGAGTTTGAAAAGATTTATGATGGTGAAATTATTTTAGTTTCAAAAGATGAAAAAAATAGTGATTCAA
CTATTAGGAATTTTGGTTTATCTTGGTTTATTAAATCATTTTTTAAACAAGATAGATTGATTTATCATGTATTATTTGCA
GCATTTATTATTCAAATTTTTGCATTAATTACTCCACTATTTACGATGATAATTATCGATAAAGTTTTTAGTTCTAGTGG
AAATAGTACTTTGGAAGTTTTAGTTATAGGACTTTTTATCATAGCAATTTTTGATTTTATTATTAGTTATTCAAGAAAGC
ATTTACTTAGTCATATGACATCTATTATTGATGTTACGATGGTTTCAAAGTTTTTTAGACATCTTACTTCTTTGCCTTTA
AGCTTTTTTTCTAGCAAACAATCAGGAGATGTAGTTGCTAGGTTTAAAGAGGTTGAATCTATTAGAAACTTTATTAGTTC
AGGGCTTTTAACTTCTATTATAGATTTTCCCTTTGGAATTATCTTTTTAGTAGTTATGTTTTTATTTTCTCCATCACTTA
CAATTATTGTATTAATTGCTATTATAATTATTTTTCTTTTATATGGTGTTGCAAATCCAATCTTAAAAGAGAGATTAAAA
AAGAAATTACAACTTTCTACTGATTCTCAATCATATCTTTTTGATTGTGTTTCTTCTATTGAAACTATAAAATCAATGTC
AATAGAACCAACAATAAGAAGAGATTATGAAGAGCAATTAGCAAAGCAGACTAAACACAATGCGAAAACAGATGATATAT
CAGGAAATATCTCTCAAATAGCTTCTTTTGTAAATAAAATTACAGTCGCATTATGTTTATGGATAGGTGCAATTGGAGTT
TTAAATGGAGATATGACAGCAGGACAATTAATAGCTTTTAATATGCTAATTGGAAGAATTATGGCTCCAGCTCAAAGAAT
AGCACAAACTTTACAACAAATTTATCAAGTGAAAATATCAACAAAAAGAGTTCAAGAAATATTTAATACAAAAGAAGAAA
TATCAATAAATTCTACACAAACAAATTTACCAAAATTAAAAGGTGAAGTTTTATTTGATAAAGTCTCTTTTAAATATAAC
GAAGAAGCTCCATTAGTTTTAAATAATATAAATTTAAAAGTAAATATTGGAGATATAATTGGAGTTGTAGGAAAATCTGG
TTCAGGAAAAACTACTTTTACAAGATTACTTCAAAGACTTTTTCATCCAACGAGTGGAAAAATTTCAATAGATGGTTTTG
ATATTTCGACAATAGATCCAAATTGGCTTAGACGACAAATAGGTGTTGTTATGCAAGATAATTTATTATTAAATAAAAGT
ATAAAAGATAATATTACTTTATCAAATCCAAGAGCAACAATGAAAGAAGTAGAATATGTGTGTCAATTAAGTGGAGCAAG
TGACTTTATATTAAGTTTACCAAAAGCTTATGACACTATTGTAGGTGAGCGAGGAAATCTTTTATCTACAGGTCAAAGAC
AAAGAATAGCAATAGCAAGAGCTCTTATAAATAATCCTAAAATTTTAATCTTTGATGAAGCAACTAGTGCTATTGATTTT
GAATCAGAGATTATAATCCAAAAAAATCTAAAAAAAATATGTGAGGGAAGAACAGTATTTATCGTTTCTCATAGAGTATC
TGTTTTAAAAATTACAAATAAAATAGTCTCTTTATATGATGGAAAAATTATAGAATTAGGGACAAAAGAAGAACTACTGA
GAAATGAAAAAGGATATTTTCATAATCTATGTAAAGCACAAAATATATTAAGTGAGATATAA

Protein sequence :
MTKNKIIENELVHSFLLLTRMLNCEISYDDLIFKIGSSNEIIEEDLLYVATEYFDLKTKKVSVKLEKLKNNPLPAIVKLK
DDKYSLLFSIENDKYKIYDFDNSKQILLEKDEFEKIYDGEIILVSKDEKNSDSTIRNFGLSWFIKSFFKQDRLIYHVLFA
AFIIQIFALITPLFTMIIIDKVFSSSGNSTLEVLVIGLFIIAIFDFIISYSRKHLLSHMTSIIDVTMVSKFFRHLTSLPL
SFFSSKQSGDVVARFKEVESIRNFISSGLLTSIIDFPFGIIFLVVMFLFSPSLTIIVLIAIIIIFLLYGVANPILKERLK
KKLQLSTDSQSYLFDCVSSIETIKSMSIEPTIRRDYEEQLAKQTKHNAKTDDISGNISQIASFVNKITVALCLWIGAIGV
LNGDMTAGQLIAFNMLIGRIMAPAQRIAQTLQQIYQVKISTKRVQEIFNTKEEISINSTQTNLPKLKGEVLFDKVSFKYN
EEAPLVLNNINLKVNIGDIIGVVGKSGSGKTTFTRLLQRLFHPTSGKISIDGFDISTIDPNWLRRQIGVVMQDNLLLNKS
IKDNITLSNPRATMKEVEYVCQLSGASDFILSLPKAYDTIVGERGNLLSTGQRQRIAIARALINNPKILIFDEATSAIDF
ESEIIIQKNLKKICEGRTVFIVSHRVSVLKITNKIVSLYDGKIIELGTKEELLRNEKGYFHNLCKAQNILSEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlyB NP_755448.1 hemolysin B Virulence PAI I CFT073 Protein 1e-123 43
hlyB CAD33760.1 hemolysin B Virulence PAI I 536 Protein 7e-124 43
hlyB CAD42038.1 HlyB protein Virulence PAI II 536 Protein 7e-124 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
A7H1H_1168 YP_008331100.1 type I secretion system ABC transporter, ATP-binding/permease protein, HlyB family VFG1501 Protein 4e-124 43
A7H1H_1168 YP_008331100.1 type I secretion system ABC transporter, ATP-binding/permease protein, HlyB family VFG0907 Protein 5e-124 43
A7H1H_1168 YP_008331100.1 type I secretion system ABC transporter, ATP-binding/permease protein, HlyB family VFG1557 Protein 4e-124 43
A7H1H_1168 YP_008331100.1 type I secretion system ABC transporter, ATP-binding/permease protein, HlyB family VFG0841 Protein 4e-115 43