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Name : lysS (A7H1H_0648) Accession : YP_008330592.1 Strain : Arcobacter butzleri 7h1h Genome accession: NC_021878 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.6 Position : 635898 - 637412 bp Length : 1515 bp Strand : - Note : Pfam matches to PF00152.15 tRNA-synt_2, and to PF01336.20 tRNA_anti-codon DNA sequence : TTGTTTGAGAATATATATATACAACAAAGAATAGAAAAAGCAAATAAATTAAGAGAAGATGGAATTAATCCATATTCAAA TGAAAGCTCAAGAAACTGTACTATTTCGAAATATCTAAATGTTAATAGTGATATTTTTCAATTAGAAGAAAAAAGAGATG AAAATCGAAACTACACAGTTGCAGGTAGAATTAAATTTTTTAGACTAATGGGAAAAGCAAGCTTTTTAAAAATTGAAGAT GAAAGCGGTATGCTTCAAATTTATGTAGCAAGAGATAACTTACCAGAAAATTTTTATAATGAAATTTTCAAAAAAAATAT TGAAGTTGGTGATATTATAGAAGTTTCTGGTTATCCATTTGTAACTGGACACGGTGAGCTTTCACTTCATGCTGATAGTT TAAAAATCCTTACAAAAGCGATCTCTCCACTTCCTGAAAAATTCCATGGAATTCAAGATAAAGAGTTAAGATATAGACAA AGATATTTAGACTTAATTATGAATAGTGAAGTGAGAAAAACTTTTCATATCAGAAGTAAAGTTATAAGTTTAACTAGAAG ATTTTTTGAAAACAAAGGTTTCTTAGAAGTTGAAACTCCAATGATGCACCCAATTGCAGGTGGAGCAAATGCTAAACCAT TTGTTACTCATTTCAATGCTTTAGGTGTTGATAGATTTTTAAGAATTGCACCAGAATTATATTTAAAAAGATTAATAGTT GGTGGATTTGAAGCGGTTTTTGAAATCAATAGAAACTTTAGAAATGAAGGAATGGACGCTACACATAATCCTGAATTTAC TTCAATTGAATTTTATTGGGCATATAAAACGTATAAAGATTTAATTGTTTTAACAAAAGAGTATTTTGAATATTTATTTG AAAATTTAAATTTACCAACAATTCTTCCTTATGGAGATTTTAAAATTGATTTTAATAAATTTAGCGAAATTCCACTAATT CAATCTTTATATGAAATTGGTGGTGTTCCACAAGATATAGTTGAAGATAAAGATAAAATTCTTGCTTTTTTAAAAGCTAA TAATCTTGAAGCAAATCCTAATTTAAATCTTGGTCAACTTCAAGGTGAATTGTTTGATGAGTTTGTTGAAGCAAAACTTA TAAACCCAACATTTATTACAGAATATCCAGTTGAAATTTCACCACTAGCAAGAAGAAATGATGAAAAACCTCATTTAACA GATAGATTTGAGTTATTTATTGCAGGAAAAGAAATAGCAAATGCTTTCAGTGAGTTAAATGACCCAATAGATCAACTTCA AAGATTTGAAGGACAAATTGCTGCTAAAGAAGCTGGTGATGATGAAGCACATGAAATGGATGAAGATTTTGTAAATGCTT TATCTTATGGTATGGCTCCAACAGCTGGTCAAGGAATAGGTATTGATAGACTTGTAATGATGCTTACAAATGAACACTCA ATTAGAGATGTTTTATTGTTTCCAGCAATGAAACCAATAAAACAAGAGATAGATTTATATTCAGAAGAAAAATAA Protein sequence : MFENIYIQQRIEKANKLREDGINPYSNESSRNCTISKYLNVNSDIFQLEEKRDENRNYTVAGRIKFFRLMGKASFLKIED ESGMLQIYVARDNLPENFYNEIFKKNIEVGDIIEVSGYPFVTGHGELSLHADSLKILTKAISPLPEKFHGIQDKELRYRQ RYLDLIMNSEVRKTFHIRSKVISLTRRFFENKGFLEVETPMMHPIAGGANAKPFVTHFNALGVDRFLRIAPELYLKRLIV GGFEAVFEINRNFRNEGMDATHNPEFTSIEFYWAYKTYKDLIVLTKEYFEYLFENLNLPTILPYGDFKIDFNKFSEIPLI QSLYEIGGVPQDIVEDKDKILAFLKANNLEANPNLNLGQLQGELFDEFVEAKLINPTFITEYPVEISPLARRNDEKPHLT DRFELFIAGKEIANAFSELNDPIDQLQRFEGQIAAKEAGDDEAHEMDEDFVNALSYGMAPTAGQGIGIDRLVMMLTNEHS IRDVLLFPAMKPIKQEIDLYSEEK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 9e-103 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_008330592.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 5e-103 | 49 |
