Gene Information

Name : rnhA (WSQ_00550)
Accession : YP_008333517.1
Strain : Anaplasma phagocytophilum JM
Genome accession: NC_021880
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : -
COG ID : -
EC number : 3.1.26.4
Position : 113827 - 114339 bp
Length : 513 bp
Strand : +
Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCATTGTATTATGCAGGGTATTGGAATACAATCAAAAACGGTGGATTTGTGGTACTTATGGATAGTGGGCAGGTTGT
CATATACACTGATGGAGCTTGTTCTGGTAATCCTGGCCCTGGCGGCTGGGGTGCGGTCTTTCTTTTTTCGGGTGGTGAGG
AGCGTAGGATATCAGGTGGTTGTAGCGATACAACAAACAACAGGATGGAGCTTTCTGCAGTGATAGAAGCTTTAGGTGCT
TTAGATAGGCAATGTAACGTTTGTGTGCGTACGGATAGTGTCTATGTGAAGAATGGTATTACTACGTGGATACACAAGTG
GAAGTCAAATGGCTGGCAAACTGCGAGTAAGTCTGCTGTAAAAAATGTAGATTTGTGGATGCAGCTTGAGGCACTGACGC
TGAAGCATAATGTGACGTGGGAATGGGTTAAGGCTCATGCAGGTAACAGGTATAATGTTGAGGCTGATGCACTGGCAAGA
GCTGAAGTAGAGCGCCAAGTTATGAAGCGTTGA

Protein sequence :
MSLYYAGYWNTIKNGGFVVLMDSGQVVIYTDGACSGNPGPGGWGAVFLFSGGEERRISGGCSDTTNNRMELSAVIEALGA
LDRQCNVCVRTDSVYVKNGITTWIHKWKSNGWQTASKSAVKNVDLWMQLEALTLKHNVTWEWVKAHAGNRYNVEADALAR
AEVERQVMKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 9e-30 50