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Name : N220_00695 (N220_00695) Accession : YP_008337619.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Virulence Product : hemolysin Function : - COG functional category : - COG ID : - EC number : - Position : 135243 - 138104 bp Length : 2862 bp Strand : - Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGGAACTAGACTTACAACCCTATCAAATGGGCTAAAAAACACTTTAACGGCAACCAAAAGTGGCTTACATAAAGCCGG TCAATCATTAACCCAAGCCGGCAGTTCTTTAAAAACTGGGGCAAAAAAAATTATCCTCTATATTCCCCAAAATTACCAAT ATGATACTGAACAAGGTAATGGTTTACAGGATTTAGTCAAAGCGGCCGAAGAGTTGGGGATTGAGGTACAAAGAGAAGAA CGCAATAATATTGCAACAGCTCAAACCAGTTTAGGCACGATTCAAACCGCTATTGGCTTAACTGAGCGTGGCATTGTGTT ATCCGCTCCACAAATTGATAAATTGCTACAGAAAACTAAAGCAGGCCAAGCATTAGGTTCTGCCGAAAGCATTGTACAAA ATGCAAATAAAGCCAAAACTGTATTATCTGGCATTCAATCTATTTTAGGCTCAGTATTGGCTGGAATGGATTTAGATGAG GCCTTACAGAATAACAGCAACCAACATGCTCTTGCTAAAGCTGGCTTGGAGCTAACAAATTCATTAATTGAAAATATTGC TAATTCAGTAAAAACACTTGACGAATTTGGTGAGCAAATTAGTCAATTTGGTTCAAAACTACAAAATATCAAAGGCTTAG GGACTTTAGGAGACAAACTCAAAAATATCGGTGGACTTGATAAAGCTGGCCTTGGTTTAGATGTTATCTCAGGGCTATTA TCGGGCGCAACAGCTGCACTTGTACTTGCAGATAAAAATGCTTCAACAGCTAAAAAAGTGGGTGCGGGTTTTGAATTGGC AAACCAAGTTGTTGGTAATATTACCAAAGCCGTTTCTTCTTACATTTTAGCCCAACGTGTTGCAGCAGGTTTATCTTCAA CTGGGCCTGTGGCTGCTTTAATTGCTTCTACTGTTTCTCTTGCGATTAGCCCATTAGCATTTGCCGGTATTGCCGATAAA TTTAATCATGCAAAAAGTTTAGAGAGTTATGCCGAACGCTTTAAAAAATTAGGCTATGACGGAGATAATTTATTAGCAGA ATATCAGCGGGGAACAGGGACTATTGATGCATCGGTTACTGCAATTAATACCGCATTGGCCGCTATTGCTGGTGGTGTGT CTGCTGCTGCAGCCGGCTCGGTTATTGCTTCACCGATTGCCTTATTAGTATCTGGGATTACCGGTGTAATTTCTACGATT CTGCAATATTCTAAACAAGCAATGTTTGAGCACGTTGCAAATAAAATTCATAACAAAATTGTAGAATGGGAAAAAAATAA TCACGGTAAGAACTACTTTGAAAATGGTTACGATGCCCGTTATCTTGCGAATTTACAAGATAATATGAAATTCTTACTGA ACTTAAACAAAGAGTTACAGGCAGAACGTGTCATCGCTATTACTCAGCAGCAATGGGATAACAACATTGGTGATTTAGCT GGTATTAGCCGTTTAGGTGAAAAAGTCCTTAGTGGTAAAGCCTATGTGGATGCGTTTGAAGAAGGCAAACACATTAAAGC CGATAAATTAGTACAGTTGGATTCGGCAAACGGTATTATTGATGTGAGTAATTCGGGTAAAGCGAAAACTCAGCATATCT TATTCAGAACGCCATTATTGACGCCGGGAACAGAGCATCGTGAACGCGTACAAACAGGTAAATATGAATATATTACCAAG CTCAATATTAACCGTGTAGATAGCTGGAAAATTACAGATGGTGCAGCAAGTTCTACCTTTGATTTAACTAACGTTGTTCA GCGTATTGGTATTGAATTAGACAATGCTGGAAATGTAACTAAAACCAAAGAAACAAAAATTATTGCCAAACTTGGTGAAG GTGATGACAACGTATTTGTTGGTTCTGGTACGACGGAAATTGATGGCGGTGAAGGTTACGACCGAGTTCACTATAGCCGT GGAAACTATGGTGCTTTAACTATTGATGCAACCAAAGAGACCGAGCAAGGTAGTTATACCGTAAATCGTTTCGTAGAAAC CGGTAAAGCACTACACGAAGTGACTTCAACCCATACCGCATTAGTGGGCAACCGTGAAGAAAAAATAGAATATCGTCATA GCAATAACCAGCACCATGCCGGTTATTACACCAAAGATACCTTGAAAGCTGTTGAAGAAATTATCGGTACATCACATAAC GATATCTTTAAAGGTAGTAAGTTCAATGATGCCTTTAACGGTGGTGATGGTGTCGATACTATTGACGGTAACGACGGCAA TGACCGCTTATTTGGTGGTAAAGGCGATGATATTCTCGATGGTGGAAATGGTGATGATTTTATCGATGGCGGTAAAGGCA ACGACCTATTACACGGTGGCAAGGGCGATGATATTTTCGTTCACCGTAAAGGCGATGGTAATGATATTATTACCGATTCT GACGGCAATGATAAATTATCATTCTCTGATTCGAACTTAAAAGATTTAACATTTGAAAAAGTTAAACATAATCTTGTCAT CACGAATAGCAAAAAAGAGAAAGTGACCATTCAAAACTGGTTCCGAGAGGCTGATTTTGCTAAAGAAGTGCCTAATTATA AAGCAACTAAAGATGAGAAAATCGAAGAAATCATCGGTCAAAATGGCGAGCGGATCACCTCAAAGCAAGTTGATGATCTT ATCGCAAAAGGTAACGGCAAAATTACCCAAGATGAGCTATCAAAAGTTGTTGATAACTATGAATTGCTCAAACATAGCAA AAATGTGACAAACAGCTTAGATAAGTTAATCTCATCTGTAAGTGCATTTACCTCGTCTAATGATTCGAGAAATGTATTAG TGGCTCCAACTTCAATGTTGGATCAAAGTTTATCTTCTCTTCAATTTGCTAGAGCAGCTTAA Protein sequence : MGTRLTTLSNGLKNTLTATKSGLHKAGQSLTQAGSSLKTGAKKIILYIPQNYQYDTEQGNGLQDLVKAAEELGIEVQREE RNNIATAQTSLGTIQTAIGLTERGIVLSAPQIDKLLQKTKAGQALGSAESIVQNANKAKTVLSGIQSILGSVLAGMDLDE ALQNNSNQHALAKAGLELTNSLIENIANSVKTLDEFGEQISQFGSKLQNIKGLGTLGDKLKNIGGLDKAGLGLDVISGLL SGATAALVLADKNASTAKKVGAGFELANQVVGNITKAVSSYILAQRVAAGLSSTGPVAALIASTVSLAISPLAFAGIADK FNHAKSLESYAERFKKLGYDGDNLLAEYQRGTGTIDASVTAINTALAAIAGGVSAAAAGSVIASPIALLVSGITGVISTI LQYSKQAMFEHVANKIHNKIVEWEKNNHGKNYFENGYDARYLANLQDNMKFLLNLNKELQAERVIAITQQQWDNNIGDLA GISRLGEKVLSGKAYVDAFEEGKHIKADKLVQLDSANGIIDVSNSGKAKTQHILFRTPLLTPGTEHRERVQTGKYEYITK LNINRVDSWKITDGAASSTFDLTNVVQRIGIELDNAGNVTKTKETKIIAKLGEGDDNVFVGSGTTEIDGGEGYDRVHYSR GNYGALTIDATKETEQGSYTVNRFVETGKALHEVTSTHTALVGNREEKIEYRHSNNQHHAGYYTKDTLKAVEEIIGTSHN DIFKGSKFNDAFNGGDGVDTIDGNDGNDRLFGGKGDDILDGGNGDDFIDGGKGNDLLHGGKGDDIFVHRKGDGNDIITDS DGNDKLSFSDSNLKDLTFEKVKHNLVITNSKKEKVTIQNWFREADFAKEVPNYKATKDEKIEEIIGQNGERITSKQVDDL IAKGNGKITQDELSKVVDNYELLKHSKNVTNSLDKLISSVSAFTSSNDSRNVLVAPTSMLDQSLSSLQFARAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyA | NP_755445.1 | hemolysin A | Virulence | PAI I CFT073 | Protein | 6e-150 | 47 |
| hlyA | CAD42039.1 | HlyA protein | Virulence | PAI II 536 | Protein | 3e-148 | 46 |
| hlyA | CAD33759.1 | hemolysin A | Virulence | PAI I 536 | Protein | 1e-146 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| N220_00695 | YP_008337619.1 | hemolysin | VFG0906 | Protein | 3e-150 | 47 |
| N220_00695 | YP_008337619.1 | hemolysin | VFG0840 | Protein | 3e-146 | 47 |
| N220_00695 | YP_008337619.1 | hemolysin | VFG1558 | Protein | 2e-148 | 46 |
| N220_00695 | YP_008337619.1 | hemolysin | VFG1500 | Protein | 8e-147 | 46 |
