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Name : N220_12835 (N220_12835) Accession : YP_008339974.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 2432979 - 2434937 bp Length : 1959 bp Strand : - Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGATTGCAGAATTAGGCAATTATACGTTGGCATTAGCCCTAGCGATTTCTATCTTGTTGGCAGTTTTACCGCTTTGGGG AGCAGAAAAGCAAAATAGCACCTTAATTGCTCTTGCCCGCCCGATGACTTGGGCAATGTTTTTGGCATTGACTGTCTCTT TTGGTTCGCTGTTTTATCTGTTTGCGGTGAATGATTTTACCGTGCAATATGTGGTGAACAACTCCAATAGCCGTTTACCG TTGCAATATCGTTTATCTGCGGTGTGGGGCGCTCACGAAGGCTCATTATTGCTTTGGGTTTGGTTGTTGTCGCTTTGGTC TGTCGGGGTAGCAACCTTTACCCGTAAAATGCCGGAAGATGCCGTTGCTCGAGTGTTAGGACTAATGGGGGTCATTGGCA TCGGCTTTTTGATGTTTGTGATTTTTACCTCCAACCCGTTTGATAGAACTTTCCCAAATTTTCCGATTGATGGCAAAGAA TTAAACCCAATGCTGCAAGATGTGGGCTTGATCTTCCACCCACCGTTGCTTTATATGGGCTATGTGGGTTTCTCCGTTGC CTTTGCTTTTGCGATTGCCTCACTGATGACAGGGCGTTTAGATACTGCGTGGGCAAGATGGTCTCGTCCGTGGACAATGG CAGCGTGGGTATTTTTAACGCTCGGTATCGTGCTTGGTTCTTGGTGGGCATACTACGAACTTGGTTGGGGTGGCTGGTGG TTCTGGGATCCTGTCGAGAATGCCTCATTAATGCCGTGGCTCGCAGGAACAGCACTGATTCATTCATTAGCAGTGACTGA AAAACGAGGCACATTTAAAGCGTGGACGGTCTTATTAGCGATTCTTGCTTTCTCGCTCTGTTTAGTGGGGACTTTCTTAG TGCGTTCAGGCATTTTGGTGTCAGTTCACGCCTTTGCTTCAGATCCAACTCGTGGTTTATACATCTTGGCTTACTTGGTG TTAGTAGTAGGTGGTTCTTTACTGCTGTATGCATTCAAAGGCTCGGAAATTAAAAGCTTAGATAACTATGAACGCTATTC AAGAGAAACGATGCTACTCATTAATAATATTTTATTAATGGCATTTTTATCGGTGGTGTTTTTAGGGACCTTACTGCCAT TAATTCACAAACAAATCGGCTTAGGGACGATTTCAATCGGGGCACCATTTTTTGACCAAATGTTCTTAATTTTAATGGTT CCTTTCTCATTTGTATTAGGGATTGGACCATTAGTGAAATGGCGTAGAGACCAAGTTTCTGCTATTCGTAAACCGGTAAT TATTGCAACTATTTTAATGGCATTGCTTGGATTCGGATTGCCATACTTATTCCGTAACACCATTACCGTGAGTGTGGTGT TAGGCACGATGATGTCTGTCTTTATTGTGTTACTTAGCCTGTATGAGCTACACCAACGTGCAACCCATCGCCACTCGTTC TTAAGTGGCATTTTCAAACTGTCCCGTTCACATTGGGGAATGGTGCTGGCTCACTTAGGGGTTGCGATGACAGTGTTCGG CATTGCATTTAGCCAAAATTTCAGCATTGAACGAGATGTCAGAATGAATGTGGGTGATAAAGCTGAGATTTTAGATTACC AATTTGAATTTAAAGGTATTAAAATCACCGATGGGGCAAACTATCAAGGCGGCACTGCCGAGCTTGAAATTACTCGAAAC GGTAAATATGAAGCCACACTTAATGCTGAAAAACGTTTCTATACGGTGAGCCGAATGGGAATGACCGAAGCGGCGATTGA CTGGGGCTTTACCCGAGATTTATACGCTGCACTTGGCGAAAAATTAGAAGATAACTCTTGGGCAGTGCGTTTGTATTATA AACCGTTCATTCGCTGGATTTGGATTGGCGGGCTGTTTATGGCTCTCGGTGGTTTACTCTGTATGTTGGATAAACGCTAC CGTTTACGCATTGAAAATAAAAAAGAAGTGATAGCTTAA Protein sequence : MIAELGNYTLALALAISILLAVLPLWGAEKQNSTLIALARPMTWAMFLALTVSFGSLFYLFAVNDFTVQYVVNNSNSRLP LQYRLSAVWGAHEGSLLLWVWLLSLWSVGVATFTRKMPEDAVARVLGLMGVIGIGFLMFVIFTSNPFDRTFPNFPIDGKE LNPMLQDVGLIFHPPLLYMGYVGFSVAFAFAIASLMTGRLDTAWARWSRPWTMAAWVFLTLGIVLGSWWAYYELGWGGWW FWDPVENASLMPWLAGTALIHSLAVTEKRGTFKAWTVLLAILAFSLCLVGTFLVRSGILVSVHAFASDPTRGLYILAYLV LVVGGSLLLYAFKGSEIKSLDNYERYSRETMLLINNILLMAFLSVVFLGTLLPLIHKQIGLGTISIGAPFFDQMFLILMV PFSFVLGIGPLVKWRRDQVSAIRKPVIIATILMALLGFGLPYLFRNTITVSVVLGTMMSVFIVLLSLYELHQRATHRHSF LSGIFKLSRSHWGMVLAHLGVAMTVFGIAFSQNFSIERDVRMNVGDKAEILDYQFEFKGIKITDGANYQGGTAELEITRN GKYEATLNAEKRFYTVSRMGMTEAAIDWGFTRDLYAALGEKLEDNSWAVRLYYKPFIRWIWIGGLFMALGGLLCMLDKRY RLRIENKKEVIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 6e-154 | 62 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-132 | 51 |
