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Name : N220_02805 (N220_02805) Accession : YP_008338021.1 Strain : Mannheimia haemolytica USMARC_2286 Genome accession: NC_021883 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 558206 - 560110 bp Length : 1905 bp Strand : + Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGCTACCGGAACTCGGCTATTTTTCACTTTTATTGGCTGCAATTAGTGCCATTTTTCAAGTTGGTTTTGCACTTCTAGG CGAAGTTCGCAAGCAATATCATTGGCTGGCATTGGCTCCGCTTTTCACTTATTTGCAAGCTGCTTTTACCACATTTTCCT TTTCTACCTTAGCTTATGCTTTTCTAACCGATGATTTTTCGGTTATCTACGTTGCCGCTCATTCCAACAGCCAGCTCCCC GATTTTTTTAAATTTGCCGCCACTTGGGGCGGACACGAAGGCTCAATGCTGTTTTGGCTCACCGCTCTTGTGATTTGGTC TGCGGTATTTTGCAAATTTTCGCAAAAAATTGACCGCTTGTTTGCCAACCGAACCTTAGCGATGTTAGGGCTAATTGCAC TAGGTTTTCTACTTTTCATTCTATTGGTTTCCAGCCCATTTGAACGTGGCTTTCCACCACCACCTGAAGGGCGAGATCTC AACCCAATGTTGCAAGATATTGGGCTCATCTTTCACCCGCCTTTGCTCTACTTGGGCTATGTCGGCTTTGCGGTGAGCTT TGCAATGATTGTCGCCGCCCTCGTTTCAGGCGGAATGGACGCTGCGATTATGCGTTGGCTTCGTCCGTGGACGATGATTT CGTGGGGATTTCTCACCGCCGGCATTATTTTAGGGGCGTGGTGGGCATATTACGAACTCGGCTGGGGTGGCTGGTGGTTT TGGGATCCGGTGGAAAATGCCTCCCTAATGCCTTGGCTACTTGGCACCGCATTGGTGCATAGTTTAATTGTGAGCCAACA GCGTGGCATTTTCTATTATTGGACGATTCTACTTGCCATTTTCGCCTTTGCTTTAAGCCTATTAGGCACGTTTATTGTTC GTTCGGGTGTACTGACCTCGGTTCATGCCTTTGCGGTCGATCCCGACAGAGGAATGGCACTGCTGATCTTATTCTTCGGC TTAAGTTTCATTGCCCTTGCTCTGTTTGCATTCCGAGCGAATCTCTGGCAAGGCAAAGTGCGTTTCAACTTACTTTCTAA AGAAACGGCATTTTTATTGATTAACGGCTTATTTAGTGTGGCTGCTTCTGTGGTATTGCTGGGGACTTTCTACCCGATGA TCTTCACAGTGATGAATTGGGGATCGATTTCAGTGGGGGCCCCCTATTTCAATAGCGTATTCACGCCACTAGCGTTACTG TTAATGATAGTAATGGGCTTTGCGGTGGTGCTGGGCTGGAAACAGATTTCAAATAAGCAGATATTGGTAAAACTTTGGTT GCTGCCGATTGCAGTCGGTTTAGCGTTAGGGTTGATTTATGCCTCCATCTCGCAAAGAGAGCATTTTGCTTTGCAGCCGT TACCCACCATATTTATCAGCCTTGCGATCTGGATTATTCTCACTCATTTGCCCTATTCGCAAAAAATGTGGCAAATTCGA CCGCTTGCGATGCGGTTAGCCCATATCGGCTTTGCGGTTTGCGTGATTGGGGCAATGATGAACAGTTATTACGGCGATGA AATCGGCGTGCGGTTAAAGCCGAATCAAGCAGCGGAACTTGCCGGTTATACCTTTAAATATGAAGATTATCACGATCTCA TCGGTCCGAACTACACCGCCGAGCAAGCCGTTTTTTCTATCAGCCGAGATGAACAGTTGCTGGCAACCGTCACACCGGAA AGACGCTATTATGATGTAAGAACGATGACAATGGCAGAAGTAGGGCTTTTCCACCACAATTTAGACGATATTTATATTGT GATGGGGGATAAGTTCGGCAATTTAGAATATGCCTTCCGTTTGCACTATAAGCCTTATGTGCAAGCCTTATGGTTAGGTG GTATGATGATGGTAATGGCCGCCCTGTTGGCATTATTCGGTTATCGTAGAGAAAACAAAAAATGA Protein sequence : MLPELGYFSLLLAAISAIFQVGFALLGEVRKQYHWLALAPLFTYLQAAFTTFSFSTLAYAFLTDDFSVIYVAAHSNSQLP DFFKFAATWGGHEGSMLFWLTALVIWSAVFCKFSQKIDRLFANRTLAMLGLIALGFLLFILLVSSPFERGFPPPPEGRDL NPMLQDIGLIFHPPLLYLGYVGFAVSFAMIVAALVSGGMDAAIMRWLRPWTMISWGFLTAGIILGAWWAYYELGWGGWWF WDPVENASLMPWLLGTALVHSLIVSQQRGIFYYWTILLAIFAFALSLLGTFIVRSGVLTSVHAFAVDPDRGMALLILFFG LSFIALALFAFRANLWQGKVRFNLLSKETAFLLINGLFSVAASVVLLGTFYPMIFTVMNWGSISVGAPYFNSVFTPLALL LMIVMGFAVVLGWKQISNKQILVKLWLLPIAVGLALGLIYASISQREHFALQPLPTIFISLAIWIILTHLPYSQKMWQIR PLAMRLAHIGFAVCVIGAMMNSYYGDEIGVRLKPNQAAELAGYTFKYEDYHDLIGPNYTAEQAVFSISRDEQLLATVTPE RRYYDVRTMTMAEVGLFHHNLDDIYIVMGDKFGNLEYAFRLHYKPYVQALWLGGMMMVMAALLALFGYRRENKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 6e-91 | 43 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-83 | 42 |
