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Name : SN31241_14070 (SN31241_14070) Accession : YP_008359324.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Unknown Product : Protein translocase subunit SecD Function : - COG functional category : - COG ID : - EC number : - Position : 1453356 - 1455170 bp Length : 1815 bp Strand : + Note : preprotein translocase subunit SecD PRK05812; Protein translocase subunit SecD of Bacteria UniRef RepID=SECD_HAEIN DNA sequence : ATGCTGGTCGTCGTGATTATCGTCGGCCTGCTTTACGCACTTCCCAACCTGTATGGTGAGGATCCGGCTGTTCAAATCAC TGGCGTGCGCGGCGTCGCCGCCAGTGAGCAAACGCTGATCCAGGTCCAGAAAACGTTACAAGAAGAAAAAATTCCCGCTA AGTCTGTGGCACTGGAAGAGGGCGCTATTCTTGCGCGCTTCGACACCACCGATACCCAGCTACGCGCCCGTGAAGCGCTG ATGAGCGTGCTGGGGGATAAATATGTCGTGGCGCTTAACCTTGCGCCGGCTACGCCGCGCTGGTTGGCGGCTATTCACGC CGATCCGATGAAGCTCGGTCTTGATCTGCGCGGCGGCGTTCACTTCCTGATGGAAGTGGATATGGATACCGCGTTAGGTA AACTCCAGGAACAAAATATCGATAGCCTGCGCAGCGATCTGCGTGAAAAAGGCATTCCTTATACCACCGTTCGTAAAGAA AATAATTATGGGTTGAGCATCACGTTCCGTGACAGCAAAGCGCGTGATGAGGCGATCGCCTATCTGACGCCGCGTCATCG TGACCTGGTGATTTCCAGCCAGGGCGGTAATCAACTTCGCGCGGTAATGACCGATGCGCGCCTGAGCGAAGCGCGCGAAT ACGCCGTTCAGCAGAACATTAATATTCTGCGTAACCGTGTTAACCAACTGGGCGTCGCGGAGCCTGTCGTACAACGCCAG GGCGCAGACCGTATTGTGGTTGAGCTGCCGGGTATCCAGGATACCGCTCGCGCGAAAGAAATTCTCGGCGCGACCGCGAC GCTGGAATTCCGTCTGGTGAATACCAACGTTGACCAGGCCGCCGCTGCTGCCGGGCGCGTACCGGGTGATTCCGAAGTGA AACAGACCCGCGAAGGTCAGCCGGTGGTATTGTACAAACGCGTGATCCTCACCGGCGACCATATCACCGACTCGACGTCC AGCCAGGATGAATATAACCAACCGCAGGTTAACATCTCGCTGGATAGCGCAGGCGGCAATATCATGTCTAACTTCACTAA GGACAATATCGGCAAACCGATGGCGACCCTGTTTGTGGAGTATAAAGACAGCGGTAAGAAAGACGCTAACGGTCGCGCCG TACTGGTGAAACAGGAAGAAGTGATTAACATTGCCAACATCCAGTCCCGGCTGGGTAACAGCTTCCGTATTACTGGTATC AGCAACCCGAACGAAGCGCGTCAGCTCTCGTTGTTGTTGCGTGCGGGCGCCCTGATTGCGCCGATTCAGATCGTTGAAGA GCGCACCATTGGCCCGACTCTGGGTATGCAGAACATCAAGCAGGGCCTGGAAGCCTGTCTGGCCGGTCTGGTGGTCTCCA TCCTGTTCATGATCTTCTTCTATAAGAAGTTTGGTCTGATTGCGACCAGCGCGTTAGTGGCTAACCTGGTGTTGATTGTC GGTATCATGTCGCTGTTGCCGGGGGCAACGCTCAGTATGCCGGGGATTGCGGGTATCGTGTTAACCCTTGCGGTGGCGGT CGACGCCAACGTTCTGATTAACGAACGTATCAAAGAAGAGTTGAGTAATGGCCGCACGGTACAGCAGGCGATAAACGAAG GCTATGCCGGCGCGTTCAGTTCCATCTTCGATGCGAACATCACGACGCTGATTAAAGTCATCATTCTGTATGCCGTTGGT ACCGGGGCAATTAAAGGGTTCGCGATTACGACCGGTATCGGTGTGGCGACGTCGATGTTTACCGCGATTATCGGTACGCG TGCTATCGTAAACCTGCTATATGGCGGCAAGCGCGTCACTAAGCTGTCAATCTGA Protein sequence : MLVVVIIVGLLYALPNLYGEDPAVQITGVRGVAASEQTLIQVQKTLQEEKIPAKSVALEEGAILARFDTTDTQLRAREAL MSVLGDKYVVALNLAPATPRWLAAIHADPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLREKGIPYTTVRKE NNYGLSITFRDSKARDEAIAYLTPRHRDLVISSQGGNQLRAVMTDARLSEAREYAVQQNINILRNRVNQLGVAEPVVQRQ GADRIVVELPGIQDTARAKEILGATATLEFRLVNTNVDQAAAAAGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTS SQDEYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEVINIANIQSRLGNSFRITGI SNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYKKFGLIATSALVANLVLIV GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAINEGYAGAFSSIFDANITTLIKVIILYAVG TGAIKGFAITTGIGVATSMFTAIIGTRAIVNLLYGGKRVTKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 7e-118 | 48 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 4e-118 | 48 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 4e-118 | 48 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-117 | 48 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 4e-118 | 48 |
