Gene Information

Name : SN31241_21590 (SN31241_21590)
Accession : YP_008360076.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Inositol phosphate phosphatase sopB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2204333 - 2205934 bp
Length : 1602 bp
Strand : -
Note : inositol phosphate phosphatase SopB PRK15378; Inositol phosphate phosphatase sopB of Enterobacteriaceae UniRef RepID=SOPB_SALTY

DNA sequence :
ATGCAGATTCTCTCAGGCCAGGGCAAAGCACCGGCTAAAGCGTCCGACGTTCGCCCGGAAATTATTGTCCTGCGAGAACC
CGGCGCGACATGGGGGAATTATCTACAGCATCAGAAGGCGTCTAACCACTCGCTGCATAACCTCTATAACTTACAGCGCG
ATCTTCTTACCGTCGCGGCAACCGTTCTGGGTAAACAAGACCCGGTTCTAACGTCAATGGCAAACCAAATGGAGTTAGCC
AAAGTTAAAGCGGACCGGCCAGCAACAAAACAAGAAGAAGCCGCGGCAAAAGCATTGAAGAAAAATCTTATCGAACTTAT
TGCAGCACGCACTCAGCAGCAGGATGGCTTACCTGCAAAAGAAGCTCATCGCTTTGCGGCAGTAGCGTTTAGAGATGCTC
AGGTCAAGCAGCTTAATAACCAGCCCTGGCAAACCATAAAAAATACACTCACGCATAACGGGCATCACTATACCAACACG
CAGCTCCCTGCAGCAGAGATGAAAATCGGCGCAAAAGATATCTTTCCCAGTGCTTATGAGGGAAAGGGCGTATGCAGTTG
GGATACCAAGAATATTCATCACGCCAATAATTTGTGGATGTCCACGGTGAGTGTGCATGAGGACGGTAAAGATAAAACGC
TTTTTTGCGGGATACGTCATGGCGTGCTTTCCCCCTATCATGAAAAAGATCCGCTTCTGCGTCACGTCGGCGCTGAAAAC
AAAGCCAAAGAAGTATTAACTGCGGCACTTTTTAGTAAACCTGAGTTGCTTAACAAAGCCTTAGCGGGCGAGGCGGTAAG
CCTGAAACTGGTATCCGTCGGGTTACTCACCGCGTCGAATATTTTCGGCAAAGAGGGAACGATGGTCGAGGACCAAATGC
GCGCATGGCAATCGTTGACCCAGCCGGGAAAAATGATTCATTTAAAAATCCGCAATAAAGATGGCGATCTACAGACGGTA
AAAATAAAACCGGACGTCGCCGCATTTAATGTGGGTGTTAATGAGCTGGCGCTCAAGCTCGGCTTTGGCCTTAAGGCATC
GGATAGCTATAATGCCGAGGCGCTACATCAGTTATTAGGCAATGATTTACGCCCTGAAGCCAGACCAGGTGGCTGGGTTG
GCGAATGGCTGGCGCAATACCCGGATAATTATGAGGTCGTCAATACATTAGCGCGCCAGATTAAGGATATATGGAAAAAT
AACCAACATCATAAAGATGGCGGCGAACCCTATAAACTCGCACAACGCCTTGCCATGTTAGCCCATGAAATTGACGCGGT
ACCCGCCTGGAATTGTAAAAGCGGCAAAGATCGTACAGGGATGATGGATTCAGAAATCAAGCGAGAGATCATTTCCTTAC
ATCAGACCCATATGTTAAGTGCGCCTGGTAGTCTTCCGGATAGCGGTGGACAGAAAATTTTCCAAAAAGTATTACTGAAT
AGCGGTAACCTGGAGATTCAGAAACAAAATACGGGCGGGGCGGGAAACAAAGTAATGAAAAATTTATCGCCAGAGGTGCT
CAATCTTTCCTATCAAAAACGAGTTGGGGATGAAAATATTTGGCAGTCAGTAAAAGGCATTTCTTCATTAATCACATCTT
GA

Protein sequence :
MQILSGQGKAPAKASDVRPEIIVLREPGATWGNYLQHQKASNHSLHNLYNLQRDLLTVAATVLGKQDPVLTSMANQMELA
KVKADRPATKQEEAAAKALKKNLIELIAARTQQQDGLPAKEAHRFAAVAFRDAQVKQLNNQPWQTIKNTLTHNGHHYTNT
QLPAAEMKIGAKDIFPSAYEGKGVCSWDTKNIHHANNLWMSTVSVHEDGKDKTLFCGIRHGVLSPYHEKDPLLRHVGAEN
KAKEVLTAALFSKPELLNKALAGEAVSLKLVSVGLLTASNIFGKEGTMVEDQMRAWQSLTQPGKMIHLKIRNKDGDLQTV
KIKPDVAAFNVGVNELALKLGFGLKASDSYNAEALHQLLGNDLRPEARPGGWVGEWLAQYPDNYEVVNTLARQIKDIWKN
NQHHKDGGEPYKLAQRLAMLAHEIDAVPAWNCKSGKDRTGMMDSEIKREIISLHQTHMLSAPGSLPDSGGQKIFQKVLLN
SGNLEIQKQNTGGAGNKVMKNLSPEVLNLSYQKRVGDENIWQSVKGISSLITS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopB YP_216030.1 outer protein Virulence SPI-5 Protein 0.0 99
sopB NP_460064.1 secreted effector protein Virulence SPI-5 Protein 0.0 99
sigD NP_455588.1 cell invasion protein Virulence SPI-5 Protein 0.0 98
sopB AAC33723.1 SopB Virulence SPI-5 Protein 0.0 98
sopB AAK27355.1 SopB Virulence SPI-5 Protein 0.0 91
sopB AAK27356.1 SopB Virulence SPI-5 Protein 1e-173 86
sopB AAK27357.1 SopB Virulence SPI-5 Protein 1e-159 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_21590 YP_008360076.1 Inositol phosphate phosphatase sopB VFG0465 Protein 0.0 99
SN31241_21590 YP_008360076.1 Inositol phosphate phosphatase sopB VFG0992 Protein 5e-83 47