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Name : SN31241_38620 (SN31241_38620) Accession : YP_008361777.1 Strain : Salmonella enterica USMARC-S3124.1 Genome accession: NC_021902 Putative virulence/resistance : Virulence Product : ATP-binding casette (ABC) transporter IroC Function : - COG functional category : - COG ID : - EC number : - Position : 3919843 - 3923478 bp Length : 3636 bp Strand : + Note : ABC-type multidrug transport system, ATPase and permease components COG1132; ATP-binding casette (ABC) transporter IroC of Enterobacteriaceae UniRef RepID=Q6KD93_ECOLX DNA sequence : ATGCCCGCTCGTGCCTGGATAGTTCGCCTTGCCCGCGTGTGTTGGGAACGTAAAACACTGAGCATCATTGTCATCGTAGC ATCAGTATCGACCATTTTACTGGCTGCGCTGACGCCGCTAATAACGCGTCAGGCCGTCAATGACGCGATAGCAGGCGATA CAACCCACCTGCCGTTACTTGCCTGCGGCCTGATATTAATTGCCCTTTTTGATTTTATCGGGAATTACGTGCGCCGCGGC TATGCCGGGGAACTCTCGCTGTGGGTTCAGCATACGTTACGTAGCCGTGCGTTCGACAGTATTCAGAAACTGGACGGCGC AGGCCAGGACGCCTTGCGTACCGGGCAGGTCATTTCGCGTACCAACAGCGATCTTCAACAGGTACACACCTTGCTACAGA TGTGTCCGGTGCCGCTGGCGGTGCTCACTTACTATGTGGCCGGTATCGCGGTGATGCTATGGATGTCGCCATCCATGACG CTTATCGTGATTTGCGTACTGGCCGCTCTTGCTATTATCGCCCTGCGCGCCCGTCGCCGTGTTTTCGCGCAAACGGGGCT TGCCTCAGACCGGCTGGCGCACATGACGGAACATATGCGCGAAGTATTGGAACAGATCTCAGTGGTGAAGTCCTGCGTGG CGGAGTTACGTGAAACGCGTTGGCTCGATGGTCAGTCGCGGCAGATGGTGCGGGTACGCATCGGTGCCGCTATCTCGCAG GCGATGCCGGGCGCAACCATGCTGGCGCTACCGGTGATAGGGCAGATCGTCCTGCTGTGCTATGGCGGCTGGTCGGTGAT GAACGGGCGCATCGATCTGGGAACCTTCGTTGCGTTCGCGAGTTTTCTCGCTATGCTGACCGGCCCTACCCGCGTACTGG CATCGTTTTTGGTTATCGCACAGCGCACACAGGCGTCGGTGGAGCGCGTCTTCGCGCTTATCGACACGCGTTCTCGCATG GAAGACGGTACTGAGTCGGTTGAAGGTCAGATTATCGGGCTGGACGTGGAGAAGATGAGTTTCCACTACGACAACGGTAA CCGTATCCTCAATGAGATCTCGTTTTCCATTCACGCCGGTGAAACCGTGGCAGTGGTTGGCGCCTCCGGCTCCGGAAAAT CAACATTGCTGATGTTGCTGGCGCGCTTTTACGATCCTACCTCCGGCGGGGTGTGGCTCAACACCACTGCGGGCCAACAG AATATTCGCGACCTGAAACTGACGGCGCTTCGTCGTCGCGTTGGCGTAGTTTTTGAAGACGCGTTTCTGTTTGCCGGTAC GGTGGCGGAAAACATCGCCTATGGGCACCCGCAAGCGACTCAGGACGACATTCGACGCGCCGCCGATGCCGCAGGCGCCA GCGGGTTCATCAATGCGCTACCGCAGGGGTTCAACACCCGACTGACCGAACGCGGAAGCAACCTCTCCGGCGGCCAACGC CAGCGTATTGCGCTAGCCCGGGCACTGATTAGCGCGCCGGAACTGCTGATTCTCGATGACACCACCTCGGCGGTCGATGC CGGTACTGAAGCGGAAATTAATACGGCTCTTGGTCGTTATGCCGATAATGAGCATATGCTGCTGGTGATTGCACGCCGCC GTTCAACACTGCAGTTAGCCGATCGGATCGTCGTACTGGATAAAGGCCGCGTCGTGGATATCGGTACCCAGGCGGAGCTG GATGCAAGGTGTCCGACGTTTCGCTCGCTGATGAGCGGCGAGGGGGATTTTCTCGCCCTCGCCCCGGCGGAACAACGTGA GCTATGGCCAACAACGCAGGCGGTAAAATCCGACGACGCGCATGAGCGCCAGATACCCGCTGGAAAAGGTTTTGTCGACC GAATGACGCGCGTTCCGGAACGCGCCGTACAGATGGCGCTGGCAGGCCACGGGCGTCAAGTCTCATCGCTGCTGACGCCA GTAGCCTGGATGTTCGTCATCGCCGCCCTGCTTATCGCGCTTGATTCCGCCGCAGGCGTTGGCGTGCTGGTGCTTTTGCA GCGCGGTATTGACTCAGGCGTTGCCGCAGGGGATATGTCGACTATTGGCATATGCGCTCTGCTCGCGCTGTGTCTGGTGG CGATTGGTTGGTGCTGCTATGCGCTGCAAACGATCTTCGCCGCCCGCGCGGCAGAGTCGGTACAGCATACGGTACGCTTA CGCAGCTTCAGCCACCTGCTACGCCTGAGTCTTCCCTGGCACGAGAAGCACATCGACTCGCGTCTTACTCGCATGACCGT CGACGTTGATTCACTCGCCCGATTTCTGCAAAACGGTCTTGCCAGCGCGGCCACCAGCATCGTGACGATGGTCGCTATCG CCGCGGCAATGTTCTGGCTTGACCCCATTCTTGCATTAACGGCATTAAGCGCCGTGCCTGTAGTGGTGCTGGCGACGTGG ATTTACCGCCGTTTGAGCTCGCCTGCTTACGCCCAGGCACGGCTGGAAATTGGTAAGGTGAACAGTACGCTTCAGGAAAA GGTCTCCGGTATGCGGGTAGTGCAGTCACACGGCCAACAGAAGCAGGAAGCCGCCAGGCTACGGGCGTTATCAGACAACT TCCGCGCCACCCGCGTGCGGGCGCAAAAATACCTTGCTGTCTATTTTCCGTTCCTGACCCTCTGCACCGAGGCCGCCTAT GCCGCCGTGCTTTTAATCGGGGCGACCCGGGTCGCCGGAGGCGAAATGACGCCCGGGATACTGGCGGCGTTCTTCCTGCT ACTGGGACAATTTTATGGCCCGGTACAGCAGTTGTCAGGCATTGTTGATTCCTGGCAGCAGGCGACCGCCAGCGGCAAAC ATATCAATGCGCTATTGGCGACTGAGGAAACGGAGAATATTGAACCGTCCTCCATAACGCCTGGCACTGGCGGCGCGCTA CGTCTGGAGGCATTGACATTCCGCTATCCCGAAAAAACGCAACCTGTGCTTGATAATCTCTCGCTCACCATTCCGCCAGG AACGGTAGTCGCGGTGGTCGGACGTAGCGGCGCCGGCAAATCGACGCTGATCAAGCTGCTGGCCGGGCACTACTCTCCCG GCAGCGGGCAAATCCGTGTCGGTGAGCGCCTAATTGATGCCGCGTCGCTTAGTGATTATCGTCGCCAGACGGGGCTGGTC ACTCAGGATGTCGCATTATTTAGCGGCGATATTGCCGAAAATATCCGCTATTCGCGGCCAGACAGCAGCGACACGGAGGT GGAGATCGCGGCGCGACAGGCGGGACTCTTTGAAACTGTGCAACATCTGCCGCTGGGGTTTCGTACTCCGGTCAATAACG GCGGCACGGATCTGTCCGCGGGCCAGCGTCAGTTGATTGCCCTCGCCCGCGCCCAACTGGCGCAGGCGCACATTCTGCTG CTCGACGAGGCGACAGCGCGTATCGACCGCAGCGCCGAGGAGCGCTTAATAACCTCGCTTACCGGAGTGACGCATACCGA GAAACGCATCGCGCTTATCGTCGCGCACCGGCTGACCACCGCCCGCCGCTGCGATGTTATTGTCGTAATCGATAAAGGAT GTATCGCTGAATATGGCAGCCATGAGCAGTTGATAGCGGCTCATGGCCTGTATGCTCGTCTGTGGCGGGCCAGCGTCGGC CAGACACGCGATACGCAAGGAGAGGTCGTAGGATAG Protein sequence : MPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGDTTHLPLLACGLILIALFDFIGNYVRRG YAGELSLWVQHTLRSRAFDSIQKLDGAGQDALRTGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVMLWMSPSMT LIVICVLAALAIIALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVRIGAAISQ AMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVLASFLVIAQRTQASVERVFALIDTRSRM EDGTESVEGQIIGLDVEKMSFHYDNGNRILNEISFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWLNTTAGQQ NIRDLKLTALRRRVGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLTERGSNLSGGQR QRIALARALISAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARRRSTLQLADRIVVLDKGRVVDIGTQAEL DARCPTFRSLMSGEGDFLALAPAEQRELWPTTQAVKSDDAHERQIPAGKGFVDRMTRVPERAVQMALAGHGRQVSSLLTP VAWMFVIAALLIALDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAESVQHTVRL RSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAIAAAMFWLDPILALTALSAVPVVVLATW IYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRVVQSHGQQKQEAARLRALSDNFRATRVRAQKYLAVYFPFLTLCTEAAY AAVLLIGATRVAGGEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSITPGTGGAL RLEALTFRYPEKTQPVLDNLSLTIPPGTVVAVVGRSGAGKSTLIKLLAGHYSPGSGQIRVGERLIDAASLSDYRRQTGLV TQDVALFSGDIAENIRYSRPDSSDTEVEIAARQAGLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAQLAQAHILL LDEATARIDRSAEERLITSLTGVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIAAHGLYARLWRASVG QTRDTQGEVVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| iroC | CAC43427.2 | ABC transport protein | Virulence | PAI III 536 | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SN31241_38620 | YP_008361777.1 | ATP-binding casette (ABC) transporter IroC | VFG1653 | Protein | 0.0 | 80 |
