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Name : ccmF-1 (REMIM1_CH01295) Accession : YP_008364058.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Unknown Product : cytochrome-c-type biogenesis protein CcmF 1 Function : - COG functional category : - COG ID : - EC number : - Position : 1297582 - 1299576 bp Length : 1995 bp Strand : + Note : - DNA sequence : ATGATCATCGAGATCGGCCATTACGCTCTGGTGCTGGCGCTGGCGACGGCGCTGATCGTCTCGATCGTGCCTGTCATCGG CGCCCGCCGTCATGATCCGGCGCTGATGGATGTGGCGACATCAGGTTCGCTGGCGATGTTTGCCCTTGTCGCCTTTGCCT TCGCCGTCTTGACCTATGCCCATGTCGTCTCCGACTTCTCCGTCGAGAACGTCTGGGAGAATTCGCATTCGCTGGTGCCG CTGATCTACAAATATTCCGGCGTCTGGGGCAATCACGAGGGATCGATGATGCTCTGGCTGCTGATCCTGGCGCTGTTCAG CGCGCTGGTCGCGATCTTCGGCGCCAGTCTGCCGGAGACGCTGAAGGCCAATGTGCTTGCCGTGCAGGCCTGGATCTCGC TCGCCTTCACCCTGTTCATCCTTTTGACCTCCAATCCCTTCCTGCGGCTCGATCCGGCCCCGGCCGAGGGCCGCGATCTC AATCCGGTGCTGCAGGATGTCGGGCTCGCCATCCACCCGCCGCTGCTCTATCTCGGCTATGTCGGCTTTTCCGTCTGCTT CTCCTTCGCCATTGCAGCCCTCATTGAAGGCCGCATCGACGCCGCCTGGGCGCGCTGGGTCCGGCCCTGGACGCTCGCCG CCTGGACCTGCCTGACATTAGGCATCGCCATGGGCTCCTACTGGGCCTATTACGAGCTCGGCTGGGGCGGCTGGTGGTTC TGGGACCCGGTGGAAAACGCCTCGTTCATGCCGTGGCTCGCCGGCACCGCGCTGCTGCATTCGGCGCTCGTCATGGAAAA GCGCGAGGCGCTGAAGATCTGGACGGTGCTGCTCGCCATCCTGACCTTCTCGCTGTCGCTGATGGGCACCTTCCTGGTGC GCTCCGGGGTGCTGACCTCGGTGCATGCCTTTGCCAGCGATCCCACCCGCGGCGTCTTCATCCTGTCGATCCTGCTGATC TTCATCGGCGGAGCGCTGTCGCTGTTTGCCCTGCGGGCGCCGAAGCTTGCGGCCGGCGGGCTGTTTGCGCCGATCTCGCG CGAGGGGGCGCTCGTCCTCAACAATCTGATCCTGACGGTCGCCTGCGGCACGGTGCTGACCGGCACGCTCTATCCGCTGC TGTTGGAAACGCTGACCGGCGACAAGATCTCCGTCGGGCCGCCCTTCTTCAACCTGACCTTCGGCCTGCTGATGGCGCCG CTGCTCGTCATCGTGCCGTTCGGGCCGCTGCTGGCCTGGAAGCGCGGCGATCTGCTCGGCGCCCTGCAGCGGCTCTACCT TGTCGCGGCTCTCGCCTTCACCGCCGCGGTCATCGTCTTTTATCTCCACCATGGCGGGCCGGTGCTCTCCGTACTCGGGC TGGCGGCCGGCCTGTTCCTGATCCTCGGCGCCATTGCCGATCTCTGGTATCGGGCCGGCATCGGCAAGGTCGCCGGCAGC ATCGCCTGGCGCCGCCTGAGCGGTCTGCCGCGCTCGGCCTTCGGCACGGCGCTTGCCCATGCCGGCCTCGGCGTCAGCGT GCTCGGCATCGTCGCCGTCACCACCTTCCAGAGCGAACATGTTGTCGCGATGAAGCCGGGCGAGATAATCGAGGCCGGCG GCTACAGCCTTGCGTTTGACGGCATGCGCCCGGGCAGGGGACCGAACTACACCGAGGAGCGCGGCCACTTCACCATCCGA CGCGCCGGGGTTGCGGTCGCCGACACCTGGTCGGCCAAGCGCCTTTACACCGCCCGGCAGATGCCGACGACGGAGGCCGG CATCCTGACCTTCGGTCTCAGCCAGCTCTATGTCTCGCTCGGCGACGCCACCAAGGACGGCGGCATCGTCGTGCGCATCT GGTGGAAGCCGTTCATCCTGTGCATCTGGGGCGGCGCGCTGATCATGGCCGCCGGCGGCCTCGTCTCGCTCTCCGACCGG CGCCTGCGCGTCGGCGCACCGCGGAGAAAGGCTAAGGCAAAACCGACGACGCCTGCGATGGAGCCGGCGGAATGA Protein sequence : MIIEIGHYALVLALATALIVSIVPVIGARRHDPALMDVATSGSLAMFALVAFAFAVLTYAHVVSDFSVENVWENSHSLVP LIYKYSGVWGNHEGSMMLWLLILALFSALVAIFGASLPETLKANVLAVQAWISLAFTLFILLTSNPFLRLDPAPAEGRDL NPVLQDVGLAIHPPLLYLGYVGFSVCFSFAIAALIEGRIDAAWARWVRPWTLAAWTCLTLGIAMGSYWAYYELGWGGWWF WDPVENASFMPWLAGTALLHSALVMEKREALKIWTVLLAILTFSLSLMGTFLVRSGVLTSVHAFASDPTRGVFILSILLI FIGGALSLFALRAPKLAAGGLFAPISREGALVLNNLILTVACGTVLTGTLYPLLLETLTGDKISVGPPFFNLTFGLLMAP LLVIVPFGPLLAWKRGDLLGALQRLYLVAALAFTAAVIVFYLHHGGPVLSVLGLAAGLFLILGAIADLWYRAGIGKVAGS IAWRRLSGLPRSAFGTALAHAGLGVSVLGIVAVTTFQSEHVVAMKPGEIIEAGGYSLAFDGMRPGRGPNYTEERGHFTIR RAGVAVADTWSAKRLYTARQMPTTEAGILTFGLSQLYVSLGDATKDGGIVVRIWWKPFILCIWGGALIMAAGGLVSLSDR RLRVGAPRRKAKAKPTTPAMEPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-103 | 47 |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-78 | 45 |
