Gene Information

Name : REMIM1_CH03317 (REMIM1_CH03317)
Accession : YP_008365993.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Virulence
Product : TetR family transcriptional regulator protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3304132 - 3304695 bp
Length : 564 bp
Strand : -
Note : -

DNA sequence :
ATGTCGAACGCTCACCATCGCAAGAAACAACCGGCTCTCGTGCGCCAGCAGTTGCTGGAGGTCGCAGCGCGGCTTGCTGC
CAGCGATGGAATGGCGGCTGTCACGCTCGATGCGGTCTCTTCCGCCTCCAGCGTCAGCAAGGGCGGGCTGCTGCATCATT
TCCCGACGAAGAATGCGCTGCTCGATGCGCTGTTCGAGAGCCTGCTCGAGAAGTTCGACGTCGATATCGAGGAACTGATG
CGCGGCGATCCGCAGCCGCAGGGCCGTTTCACCCGCGCCTATTTGAGGGCGGTGTCCGGCCTCAAGGATCGTCCCGACGA
TTCAAGGAGCTGGACGCAGGTGACGATCGCGCTTCTTGCCGAACCCCGGCTGCGCCTTCGCTGGCGACGATGGGTGCAGG
CGCGGGCGGAGGAATATGTCGGCACCGATTCTTCGCTCGATGCGCAGATCGTGCGCTTTGCCGCCGACGGCCTTTGGTTT
GCCGATACGCTGGAGAGCCATGAGATCAGTGATTCTCTGAGGCGGGATCTCATCAACCGCCTTGTCGTGCTGACCGAAAA
GTAA

Protein sequence :
MSNAHHRKKQPALVRQQLLEVAARLAASDGMAAVTLDAVSSASSVSKGGLLHHFPTKNALLDALFESLLEKFDVDIEELM
RGDPQPQGRFTRAYLRAVSGLKDRPDDSRSWTQVTIALLAEPRLRLRWRRWVQARAEEYVGTDSSLDAQIVRFAADGLWF
ADTLESHEISDSLRRDLINRLVVLTEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42082.1 hypothetical protein Not tested PAI II 536 Protein 9e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REMIM1_CH03317 YP_008365993.1 TetR family transcriptional regulator protein VFG1601 Protein 4e-28 43