|
Name : glcB (REMIM1_CH00053) Accession : YP_008362869.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Unknown Product : malate synthase G Function : - COG functional category : - COG ID : - EC number : 2.3.3.9 Position : 52955 - 55126 bp Length : 2172 bp Strand : + Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA DNA sequence : ATGAGCCGCATTGATAAGAACGGTCTTGCCATCGAAACCATCCTTCATGATTTCCTGACTCAGGAGGTTCTGCCGGGTCT GGCGATCGATGCAGACAGGTTCTTTGCCGATTTTTCGGCGATCGTCCACGATCTCGCCCCGCGCAATCGCGCGCTGCTGG TCAAACGCGACGAGCTGCAGACGAAGATCGATGACTGGTATCGCCAGCATGGCGCCCCGTCGGATATGGACGACTACCAG TCCTTTCTCCGCAGCATCGGCTACCTCCTGCCGGAAGGATCGGACTTCCAGGTTTCAACCGCAAACGTCGATCCCGAAAT CGCCTCGATCGCCGGTCCGCAGCTTGTCGTTCCCGTGATGAATGCGCGTTACGCCCTGAACGCCGCCAATGCTCGCTGGG GCTCGCTCTATGACGCGCTCTACGGCACCGACGCCATTCCCGAGAACGACGGCGCCGAGAAGGGCAAGGGCTACAACCCG AAGCGCGGCGAAAAGGTCATCGCCTGGGTGCGAGATTTCCTCGATGCGGCGGCGCCGCTGCAGGACAGCAGATGGAAGGA TGTCGGCAGCTTCTTCGTCAAGGACGGAATGCTCGTCGTCAGATCGGTCGACGGCGAGCAGACAATGCTCGGGGATGGGG GGCATTTTGCCGGCTATCGCGGTGATGCCGCGGCGCCGGCGCATATTCTCCTGAAGAACAACGGCATTCATATCGATATC GTCATCGACCCGACAACGGCGATCGGCAAGGCCGATCCGGCCCATATCTCCGATGTTTGGTTGGAATCGGCAATCACCAC GATCATGGACTGCGAGGATTCGATTGCCGCCGTCGATGCCGAGGACAAGGTCGTCGTCTATCGCAACTGGCTCGGCCTGA TGAAGGGCGATCTGCAGGAAGAGGTGGCAAAGGGCGGAACGACCTTCCTCCGCAAGCTCAACCCGGATCTGGACTATACC AGCCCGGATGGCGCTTCATTCGAGTTGCATCGCCGTTCATTGATGCTGGTGCGCAATGTCGGCCACCTCATGACCAATCC CGCGATTCTCGACAAGGACGGCAATGAAGTGCCTGAGGGCATCATGGATGCCGTCATAACCGGCCTGATCGCGCTTTACG ATATCGGTCCCACTGGTCGGAAGAAGAATTCCCGCACCGGCTCCATGTATGTGGTCAAGCCGAAGATGCATGGGCCTGAG GAGGTCGCCTTCGCCGTCGAGATTTTCTCCCGGGTCGAAGACGCGCTCGGCATGGCGCGCAACACCATCAAGATGGGCAT CATGGACGAGGAGCGGCGCACGACGATCAATCTCAAGGAGTGCATCCGCGCCGCCCGCGAGCGTGTCGTCTTCATCAATA CCGGCTTCCTCGACCGCACCGGCGACGAGATCCACACTTCGATGGAAGCCGGTCCAATGATTCGCAAGGGCGATATGCGC CAGGCAGCGTGGATATCGGCCTATGAGAACTGGAACGTTGATATCGGTCTGGAATGCGGTCTTTCCGGCCATGCCCAGAT CGGCAAGGGCATGTGGGCGATGCCGGATCTGATGGCGGCAATGCTGGAACAGAAGATCGCCCACCCCAAGGCCGGCGCCA ATACCGCTTGGGTGCCTTCGCCGACGGCTGCAACCCTGCATGCCACCCATTATCACCGCGTCAACGTCGCCAAGGTCCAG CAGGGGCTGAAGGACCGGGCTCGCGCCAGGCTTTCCGACATTCTCTCCGTGCCGGTTGCGGTGCGGCCGAACTGGACGCC GGAGGAAATCCAGCGAGAGCTCGACAACAATGCCCAGGGTATCCTCGGCTATGTCGTGCGCTGGATCGATCAGGGCGTCG GCTGCTCGAAAGTGCCCGACATCAACAATATCGGCCTGATGGAGGATCGCGCGACCTTGCGCATTTCGGCCCAGCACATG GCGAATTGGCTGCATCACAAGGTTGTCACCGAAGCTCAGATCGTCGAAACGATGAAACGCATGGCTGCCATCGTCGACCG CCAGAACGAACCCGATCCAGCCTACCGGCCGATGGCCGGCAATTTCGATGATTCGATCGCTTTCCAGGCCGCCCTCGATC TCGTCCTGAAGGGCAGGGAGCAACCGAACGGCTATACTGAACCGGTGCTTCACCGCCGCCGCCTCGAGCTCAAGGCGAAA CAATCGGCGTGA Protein sequence : MSRIDKNGLAIETILHDFLTQEVLPGLAIDADRFFADFSAIVHDLAPRNRALLVKRDELQTKIDDWYRQHGAPSDMDDYQ SFLRSIGYLLPEGSDFQVSTANVDPEIASIAGPQLVVPVMNARYALNAANARWGSLYDALYGTDAIPENDGAEKGKGYNP KRGEKVIAWVRDFLDAAAPLQDSRWKDVGSFFVKDGMLVVRSVDGEQTMLGDGGHFAGYRGDAAAPAHILLKNNGIHIDI VIDPTTAIGKADPAHISDVWLESAITTIMDCEDSIAAVDAEDKVVVYRNWLGLMKGDLQEEVAKGGTTFLRKLNPDLDYT SPDGASFELHRRSLMLVRNVGHLMTNPAILDKDGNEVPEGIMDAVITGLIALYDIGPTGRKKNSRTGSMYVVKPKMHGPE EVAFAVEIFSRVEDALGMARNTIKMGIMDEERRTTINLKECIRAARERVVFINTGFLDRTGDEIHTSMEAGPMIRKGDMR QAAWISAYENWNVDIGLECGLSGHAQIGKGMWAMPDLMAAMLEQKIAHPKAGANTAWVPSPTAATLHATHYHRVNVAKVQ QGLKDRARARLSDILSVPVAVRPNWTPEEIQRELDNNAQGILGYVVRWIDQGVGCSKVPDINNIGLMEDRATLRISAQHM ANWLHHKVVTEAQIVETMKRMAAIVDRQNEPDPAYRPMAGNFDDSIAFQAALDLVLKGREQPNGYTEPVLHRRRLELKAK QSA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcB | CAE85241.1 | GlcB protein, malate synthase G | Not tested | PAI V 536 | Protein | 0.0 | 60 |
