|
Name : glcD-1 (REMIM1_CH00817) Accession : YP_008363595.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Unknown Product : glycolate oxidase subunit GlcD 1 Function : - COG functional category : - COG ID : - EC number : - Position : 851683 - 853122 bp Length : 1440 bp Strand : + Note : - DNA sequence : ATGTCCGACGCCATTCCGTTTCTTGCCCCCCGTGCCGACGTGCTGGCGCGCCGCGCCGCGATCGTCGCCGATCTGACCGA TCTCCTGCCGCCGGAATGCCTGATCCATCAGGCGCGCGAGCTGGTGCCCTTCGAAACCGACGCTTTCGTTTCCTATCGCC GCCTGCCGCTCGCCGTCGCCCTGCCGCGCACCACGGCCGAGGTTTCGGCCGTCATGCGTTATTGTCACCGCTACGGCATT CCCGTCGTACCGCGCGGCGCCGGCACCTCGCTTTCGGGCGGCGCCATTCCGCAGGAGGATGCGGTCGTGCTCGGCCTGTC GAAGATGAACAGCATCCTCGAAATCGACCTGGTGAACCGTGTCGCCGTTGTTCAGGCGGGCGTCACCAATCTCAATATTT CGGAATCCGTCTCCGCCGACGGCTTCTTCTACGCGCCTGATCCGAGTTCGCAGCTCGCCTGCACGATCGGCGGCAATATC GGCATGAATTCCGGTGGCGCCCACTGCCTGAAATATGGCGTCACCACCAACAATCTGCTCGGCGTCCGAATGGTGCTGGT CGACGGCACGGTGATCGAGCTCGGCGGCAAGGCGCTGGATGCGGCGGGTTACGATCTGCTCGGTCTCGTCTGCGGCCATG AAGGCCAGCTCGGCATCGTCACCGAGGCGACGGTGCGGCTGATCGCCAAGCCGGAAGGCGCGCGCCCGGTGCTCTTCGGC TTCGAGAGCTCGGAAGAGGCGGGCGCCTGCGTCGCCGATGTCATCGCCGCCGGCATCATCCCCGTTGCGATCGAATTCAT GGACAAGCCGGCGATCGAGATCTGCGAGGCCTTTGCCCATGCCGGCTACCCCCTCGATGTCGGCGCACTCCTGATCGTCG AGGTCGAAGGATCGGAAGCGGAGATGGATGCCACGCTGAAGGACGTCGTCGAGATCGCCCGCCGCCACGGCGTCAAGACC GTGCGCGAATGCCAGTCGGCGACCGAAGCGGCGCTGATCTGGAAGGGCCGCAAATCCGCCTTCGGCGCCACCGGCCGCAT CGCCGACTACATCTGCATGGACGGCACGGTGCCGCTCAGCCAGCTGTCGCACGTGCTGAAGAGAACCGCCGAGATCGTCG ATCACTACGGGCTACGCGTCGCCAACGTCTTCCACGCCGGCGACGGCAACATGCATCCGCTGATCCTCTTCAACGCCAAT GATCCGCAGGATGCTGCCCGCGCCGAGGCCGCCGGCAACGATATCCTGAAGCTGTGTGTCGACGCCGGCGGCTGCCTCAC CGGCGAGCACGGTGTCGGCATCGAAAAGCGTGACCTGATGCGGCACCAGTATTCAGAGGCCGATCTCGCCCAGCAGATGG CGGTGCGCGCCGCCTTTGATCCCGGCTGGCTGCTCAATCCGTCGAAGGTCTTTCCGCTGGAAGGGCGCCCCGCCGCATGA Protein sequence : MSDAIPFLAPRADVLARRAAIVADLTDLLPPECLIHQARELVPFETDAFVSYRRLPLAVALPRTTAEVSAVMRYCHRYGI PVVPRGAGTSLSGGAIPQEDAVVLGLSKMNSILEIDLVNRVAVVQAGVTNLNISESVSADGFFYAPDPSSQLACTIGGNI GMNSGGAHCLKYGVTTNNLLGVRMVLVDGTVIELGGKALDAAGYDLLGLVCGHEGQLGIVTEATVRLIAKPEGARPVLFG FESSEEAGACVADVIAAGIIPVAIEFMDKPAIEICEAFAHAGYPLDVGALLIVEVEGSEAEMDATLKDVVEIARRHGVKT VRECQSATEAALIWKGRKSAFGATGRIADYICMDGTVPLSQLSHVLKRTAEIVDHYGLRVANVFHAGDGNMHPLILFNAN DPQDAARAEAAGNDILKLCVDAGGCLTGEHGVGIEKRDLMRHQYSEADLAQQMAVRAAFDPGWLLNPSKVFPLEGRPAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcD | CAE85245.1 | GlcD protein | Not tested | PAI V 536 | Protein | 4e-97 | 49 |
