|
Name : REMIM1_PF00144 (REMIM1_PF00144) Accession : YP_008368743.1 Strain : Genome accession: NC_021911 Putative virulence/resistance : Virulence Product : leukotoxin secretion transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : 3.6.3.43 Position : 150720 - 152891 bp Length : 2172 bp Strand : + Note : - DNA sequence : ATGGGCAGCATTGATGCTGGTATCGCAAATGCTCCGGCGCAGCCGCTCGATGGTGGACTGCGCGCGCTGTGCGGGATCGC AGCCTTCTACAGGATTGCAGCCGACCCCAATCACCTCCATCATGAATTGTCACTCGGCAGTCGGGTGGCGAGCGAGCGTG AGATTCTTCGCGCGGCAGCGGCACTTGGGCTCAAGGCACGAACGACCGTTAAGCTGACCGAGGCGCGGCTGAAAACTTTG CCAGTGCCCGCTATCGTTCGCCTCTCCGAAGGAACCTTTGCCGTTTTGGGAGGCCCGATGGCGTCGGGCCTCTACCGGCT GGTCGACCCGGTCACGCGCGTAGATCGTGAAGTCACCGCGAGCGATCTTCTCCGCGAATGCGGCGCTTCGGCGATCCTTA TCGCCCGAAAGCTTGGCGGTGGCGGAACAGATCCCCGGACATTCGGGCTGAAGTGGTTTCTGCCCTCGATCTGGCGCTAC CGCAAACCGCTGGCACATGTACTTGTCGCCTCGCTCTTCGTCCAAATCTTCGCGCTGGTGACGCCATTGTTCTTCCAGGT GGTGGTCGACAAGGTCCTGACGCACAAAGGCTACTCGACGCTTTTCGTCCTCGTCGCCGGCATTGCGATCATCGGGCTCT TCGACGTCGTGCTGCAGTATCTGCGGACCTATGCACTTTCCCACACCACCAACCGCATCGACGTCGAACTCGGACAACGG CTTTTCCGGCACCTGCTTCGCCTGCCGCTCGACTATTTCGAGACCCGGTCCGCTGGACAGACGGTCGCCCGGGTAAGAGA GCTCGAGACGATCAGGAATTTCCTGACGGGGCAGGGGCTTTTCGCCGCGATTGATCTGGTCTTTGCGATCGTGTTCCTCT GCATCCTTTGGCTCTATTCCTGGAGCCTGACATTGATCGTTCTCGGCTCGATCCCGCTCTACGCCGTTGTCGGAATTCTC GTCCGCCCGCCCCTCCGTGAAATGGTCAAGGAGAAGTTTAATCGCGGCGCGGTCAGCCAGCAGCTCTTAGTCGAGACGAT CATCGGCATACAGACCGTCAAGTCTTCAGCGGTCGAGCCGGTGATGCAGGCGCAATTGGAAGAGAAGCTTGCGGCCTATG TTAAGACCGCATTCGGGACGACATTGCTTGGCGCCGGCGGGCAGAACGTCATCCAGTATATCAGCAAGCTTTCGAGCGCG CTGCTGCTGCTCTTCGGCGCGCGGGCCGTGATCAATGGCGACCTGTCAGTCGGTTCGTTAGTCGCCTTCAACATGATCGC CGGTCAGGCGACAGCACCCGTCCTCCGGCTCTCGCAGCTCTGGCAGGATTTTCAGCAGGTTCAGATTTCAATCGACCGGC TCGGCGATATCCTCAACACGCCGGTGGAGCGCACTCCCGCCACGCGCCTTACTCTTCCTCCGCCGAAGGGATCGATCGAG TTTCGCAATGTGACGTTTCGCTACAGGCCGGGCAGTCAGGATATTCTCAAGAGGATTAACCTGCACATCAGGCCGGGCGA AGTCGTCGGCATCGTCGGCGCGTCAGGATCCGGAAAATCGACGCTCACGAAACTCATCCAGCGCCTCTATCTCGCCAGCG AAGGCCAGGTCCTGCTCGACGGGATGGATATATCGCAGACGGATCCAGCCTGGCTCCGTAGTCATATCGGCGTGGTCCTG CAGGAAAATCTGCTGTTCAACAGAACGATCCATGAGAACATCTCGCTTGCCAATCCGGCATTGCCGCGAGCGCAAGTCAT GACGGCGGCTAGACTTTCGGGGGCTGACGAGTTCATATCTAGGCTGCCTCAGGGATATGACACTCTGATCGAGGAGCGGG GCGCCAATCTCTCGGGCGGTCAGCGCCAGCGCATCGCGATTGCCCGGGCGCTCGCCACCAATCCGCCGCTCCTGATCTTC GATGAAGCGACCAGTGCGCTCGACTACGAGAGCGAGCGGGTGGTGCAGGAAAACATGCGCCACATCGTCCAGGGGCGTAC CGTCGTCATTATCGCCCATCGCCTTGCCGCGGTCAGAAACTGTAACCGGATCATTGGCATGGCGGACGGGCACATTGTTG AGATGGGCACGCACGAAGAGTTGCTCCGCAAATCGGATGGTCTTTTTGCCAGGCTTTGGGCTTTGCAAAACGACGCGAGG GTCTACGGATGA Protein sequence : MGSIDAGIANAPAQPLDGGLRALCGIAAFYRIAADPNHLHHELSLGSRVASEREILRAAAALGLKARTTVKLTEARLKTL PVPAIVRLSEGTFAVLGGPMASGLYRLVDPVTRVDREVTASDLLRECGASAILIARKLGGGGTDPRTFGLKWFLPSIWRY RKPLAHVLVASLFVQIFALVTPLFFQVVVDKVLTHKGYSTLFVLVAGIAIIGLFDVVLQYLRTYALSHTTNRIDVELGQR LFRHLLRLPLDYFETRSAGQTVARVRELETIRNFLTGQGLFAAIDLVFAIVFLCILWLYSWSLTLIVLGSIPLYAVVGIL VRPPLREMVKEKFNRGAVSQQLLVETIIGIQTVKSSAVEPVMQAQLEEKLAAYVKTAFGTTLLGAGGQNVIQYISKLSSA LLLLFGARAVINGDLSVGSLVAFNMIAGQATAPVLRLSQLWQDFQQVQISIDRLGDILNTPVERTPATRLTLPPPKGSIE FRNVTFRYRPGSQDILKRINLHIRPGEVVGIVGASGSGKSTLTKLIQRLYLASEGQVLLDGMDISQTDPAWLRSHIGVVL QENLLFNRTIHENISLANPALPRAQVMTAARLSGADEFISRLPQGYDTLIEERGANLSGGQRQRIAIARALATNPPLLIF DEATSALDYESERVVQENMRHIVQGRTVVIIAHRLAAVRNCNRIIGMADGHIVEMGTHEELLRKSDGLFARLWALQNDAR VYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 1e-150 | 49 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 9e-151 | 49 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 9e-151 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REMIM1_PF00144 | YP_008368743.1 | leukotoxin secretion transporter ATP-binding protein | VFG0841 | Protein | 4e-145 | 52 |
| REMIM1_PF00144 | YP_008368743.1 | leukotoxin secretion transporter ATP-binding protein | VFG0907 | Protein | 6e-151 | 49 |
| REMIM1_PF00144 | YP_008368743.1 | leukotoxin secretion transporter ATP-binding protein | VFG1557 | Protein | 5e-151 | 49 |
| REMIM1_PF00144 | YP_008368743.1 | leukotoxin secretion transporter ATP-binding protein | VFG1501 | Protein | 5e-151 | 49 |
| REMIM1_PF00144 | YP_008368743.1 | leukotoxin secretion transporter ATP-binding protein | VFG1269 | Protein | 3e-131 | 46 |
