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Name : I137_18020 (I137_18020) Accession : YP_008382933.1 Strain : Salmonella enterica S06004 Genome accession: NC_021984 Putative virulence/resistance : Unknown Product : heme lyase subunit CcmF Function : - COG functional category : - COG ID : - EC number : - Position : 3835407 - 3837338 bp Length : 1932 bp Strand : + Note : cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGATGCCTGAATACGGCCACGCGCTGCTGTGCCTGGCGCTCGGCGTGGCGCTGCTGCTGTCCGTTTACCCGCTGTGGGG CGTGGCGCGCGGTGACGCGCGGATGATGGCGTCGGCCGGGGTGTTCGCCTGGCTGCTGTTCATCTGCGTGGCGGGCGCGT TTTTCGTGCTGGTGCACGCCTTTGTGGTTAACGACTTCACCGTGGCCTATGTCGCCGGCAACTCGAACACGCAGCTGCCG GTGTGGTACCGGGTGGCCGCCACCTGGGGGGCGCACGAGGGCTCGCTGCTGCTGTGGGTGCTGCTGATGAGCGGCTGGAC CCTGGCGGTGGCGGTGTTCAGCCGGCCGGTGCCGGCGGATATCGTCGCCCGGGTGCTGGCGGTGATGGGGATGGTCTGCG CCGGTTTTCTGGCGTTCATCCTGTTCACCTCCGGCCCGTTCGTCCGCACGCTGCCGGCCTTTCCGGTGGAGGGGCGCGAC CTGAACCCGCTGCTGCAGGACCCGGGGCTGATTTTCCACCCGCCGCTGCTGTACATGGGCTATGTCGGCTTCTCGGTGGC CTTCGCCTTCGCCATCGCCGCGCTGCTGAGCGGGCGTCTGGACAGCGCGTTCACCCGTTTTGCCCGCCCGTGGACGCTGG CGGCGTGGGTGTTCCTGACGCTGGGCATCGTGCTCGGCTCGGCGTGGGCCTACTACGAGCTGGGCTGGGGCGGCTGGTGG TTCTGGGACCCGGTGGAGAACGCCTCCTTTATGCCGTGGCTGGCGGGCACCGCCCTGCTGCACTCGCTGGCGGTCACCGA ACAGCGCGCCGGCTTTAAGGCGTGGACGCTGCTGCTGTCCATCTGCGCCTTCTCGCTGTGCCTGCTGGGCACCTTCCTGG TGCGCTCCGGGGTGCTGGTGTCGGTGCACGCCTTCGCCTCCGACCCGGCGCGCGGAATGTTTATCCTCGCCTTTATGGTG CTGGTCACCGGCGGCTCGCTGCTGCTGTTCGCCGTGCGCGGGCACAGGGTGCGTTCGCGGGTGAACAACGCGCTGTGGTC GCGCGAGTCGCTGCTGCTCGGCAACAACGTCCTGCTGATGGCCGCCATGCTGGTGGTGCTGCTGGGTACCCTGCTGCCGC TGGTGCACAAACAGCTGGGGCTGGGCAGCATTTCGGTGGGGGAGCCGTTCTTTAACACCATGTTCACCTGGCTGATGGTC CCCTTTGCCCTGCTGCTGGGGGTGGGGCCGCTGGTGCGCTGGGGCCGGGACCGGCCACGTAACATCAGGAAACTGCTGTG GGCTGCCGTTGTCACTACCCTGGTGCTGTCGGTACTTTTGCCGTGGCTGCTGGAAGATAAAATCATCGCCATGACGGCGG TGGGGATGGCGATGGCCTGCTGGATTGCGGTGCTGGCGGTGGCCGAAGCCGTACAGCGCGTGTCCCGCGGCACGAAAACC TCTCTCAGCTACTGGGGAATGGTGGCGGCGCACCTCGGGCTGGCGGTGACGATTACCGGCATCGCCTTCAGCCAGAATTA CAGCGTGGAGCGTGACGTGCGGATGCGGGCGGGCGACAGCGTGACCATTCACGACTACCGCTTCACCTTCCGGGAGGTGC GGGACATCACCGGGCCCAACTACCGCGGCGGGGTGGCCCTCATCGGGGTGACGCGCCACGGCGAGCCGGAGGCGGTGCTG CACGCGGAGAAACGGCTCTACAACACCAGCCGGATGGTGATGACCGAGGCGGCGATTGACGGCGGGCTGACCCGCGATCT GTACGCCGCGCTCGGGGAGGAGCTGGACAACGGCGCGTGGGCTGTGCGCCTGTACTACAAACCGTTTGTCCGCTGGATAT GGGCCGGGGGGCTGCTGATGGCGCTGGGCGGGCTGCTGTGCCTGGTGGACCCGCGCTACCGCCGCCGTAAACCATTGCCG GAGGCCGGATGA Protein sequence : MMPEYGHALLCLALGVALLLSVYPLWGVARGDARMMASAGVFAWLLFICVAGAFFVLVHAFVVNDFTVAYVAGNSNTQLP VWYRVAATWGAHEGSLLLWVLLMSGWTLAVAVFSRPVPADIVARVLAVMGMVCAGFLAFILFTSGPFVRTLPAFPVEGRD LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSAFTRFARPWTLAAWVFLTLGIVLGSAWAYYELGWGGWW FWDPVENASFMPWLAGTALLHSLAVTEQRAGFKAWTLLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMV LVTGGSLLLFAVRGHRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLMV PFALLLGVGPLVRWGRDRPRNIRKLLWAAVVTTLVLSVLLPWLLEDKIIAMTAVGMAMACWIAVLAVAEAVQRVSRGTKT SLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRAGDSVTIHDYRFTFREVRDITGPNYRGGVALIGVTRHGEPEAVL HAEKRLYNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGGLLCLVDPRYRRRKPLP EAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 0.0 | 99 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-121 | 55 |
