Gene Information

Name : ccmF (APA386B_2399)
Accession : YP_008393158.1
Strain : Acetobacter pasteurianus 386B
Genome accession: NC_021991
Putative virulence/resistance : Unknown
Product : cytochrome c-type biogenesis protein CcmF
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.-
Position : 2463494 - 2465479 bp
Length : 1986 bp
Strand : -
Note : Cytochrome c assembly protein

DNA sequence :
ATGCTGAGCCCCGAACTCGGACACTACGCCCTTGCGCTGGCCTGCGTGCTTGCTGCCATACAAGGTATTCTCCCCCTTAT
GGGTGCACGCCGCCGCGATGTGCGGCTGATGGCACTGGCCCCCGGCCTTGCCATTGGTCAGCTTATTGCGCTGCTAACCT
CTTTCCTCTGCCTGGTTTACGCTGCCGTTACGGATGATTTTTCTGTCCAGAACATTGCGGCCAACAGCGCAGTTTCCAAA
CCGCTGCTGTATAAGATTACCGGCGTATGGGGGAACCACGAAGGCTCCATTCTTTTATGGGCGCTTATTCTGGGCCTGTG
CGGCGCGGCTGTTGCGGCTTTTGGGCGTAACCTGCCTTCCGCTTTGCGCGCCCGCGTTATTGGCGTGCTGGGGCTGGTGG
CTACCGGGTTTGAGCTGTTCTGCCTGACCACGTCAGACCCATTTGCCCGCATCTGGCCTGCCCCCATGGATGGGCAGGGC
ATGAACCCCCTGCTGCAAGACCCCGGCTTGGCTTTTCATCCGCCTATTCTCTACACGGGTTATGTGGGCTTTGCCGTGCC
ATTTGCCTTTGCCATTGCAGCCTTGCTGGAAGGCCGAGTAGATGCCGCATGGGGCCGCTGGGTACGCCCTTGGGCCGTGG
CCGCTTGGTGCTTCCTTACCTGCGGGATCGCCATGGGGTCCTGGTGGTCTTATTACGTACTGGGCTGGGGCGGTTACTGG
TTTTGGGACCCGGTGGAAAATGCCTCGCTCATTCCGTGGCTAACAGGCACCGCCCTTATTCACTCCGCCATTGTGGTGGA
AAAGCGCGAAGCCCTTAAAATCTGGACCGTGCTGCTGGCTATTGGCACGTTCTCGTTCTCGCTTTCCGGCACCTTCCTTG
TGCGTTCAGGCATTCTGAATTCCGTGCATGCCTTTGCGAATGACCCCGCACGTGGCGTGTTCATTCTGGGCCTGCTGGCG
GTAGTGATTGGCGGTTCTTTGGCACTGTTTGCCTATCGTGCCCCATCCCTCACTTCCGGCGGGCTGTTTGCCCCGGTCTC
GCGCGAGGGGGCATTGGTGCTGAACAATATTCTGCTGTGTTCGCTCTGTGCCGTGGTCCTCACGGGCACAATGTATCCGC
CGTTTATGTCTTTGCTGTTTGACCGCACCATTTCTGTGGGCAAACCGTTTTTTGATGCCACCACCATTCCGCTGGCGCTG
CCGCTGTTCATCTTCATGGGGTTTGGCCCCATGCTGCCGTGGAAGCGCGCGCAGCTTTGGCCCATTTTGCAAAAGCTGTG
GGTAGCGGCTGTTATCACCGCCATTGCCTGCGCAATTGCGGCCTTCCGCCTTTCTGGCGTTCTGCCCATTTTGTGCGCAG
CGGCGGCTATCTGGATTATTGCATCCACCATTACGGATGTTGTGGAACGTGTGCGCCTGTTCCGCGCGCCATTTGCCACA
AGCGTGCAGCGTGCGCGCATGTTACCACGCGCCATTATTGGCACGGCCATTGCGCATATTGGCGTGGGCATTACGGTGCT
TGGGCTTTCCGCCATGTCTCAGGCCCAGCATAAAATTGTGGAAGTGCCTATTGGCACTACAGAACATCTGGCCGGGTATG
ACTGGACACTTACAAACGTAAAGCAGGAACCGGGGCCAAACTACACCGCTATGATGGGCACGTTGGAAGTACGGCGTAAC
GGGCACCTTATTACTGTCATGCACCCTTCCAAACGCAGCTTTAATACGCAAAACCAGACCACAACGGATGTTGCCATCCA
TACCAACCTGCTGGCAGATCTATACGGTGTGCTGGGTGACAAGCATGGGCCGGATAATAACCCCACCTACGTGCTGCGCC
TGCATTACAACCCGCTGGCCCCGTGGATGTGGCTGGGGGCTCTGGTTATGGCGTTTGGTGGCGCGCTTTCGCTATCTGAC
CGTCGTGTGCGTGTGGGTGCACCGCAGCGTGCCAAATCTTCTGCCGAAATGAGTGCAGCATCATGA

Protein sequence :
MLSPELGHYALALACVLAAIQGILPLMGARRRDVRLMALAPGLAIGQLIALLTSFLCLVYAAVTDDFSVQNIAANSAVSK
PLLYKITGVWGNHEGSILLWALILGLCGAAVAAFGRNLPSALRARVIGVLGLVATGFELFCLTTSDPFARIWPAPMDGQG
MNPLLQDPGLAFHPPILYTGYVGFAVPFAFAIAALLEGRVDAAWGRWVRPWAVAAWCFLTCGIAMGSWWSYYVLGWGGYW
FWDPVENASLIPWLTGTALIHSAIVVEKREALKIWTVLLAIGTFSFSLSGTFLVRSGILNSVHAFANDPARGVFILGLLA
VVIGGSLALFAYRAPSLTSGGLFAPVSREGALVLNNILLCSLCAVVLTGTMYPPFMSLLFDRTISVGKPFFDATTIPLAL
PLFIFMGFGPMLPWKRAQLWPILQKLWVAAVITAIACAIAAFRLSGVLPILCAAAAIWIIASTITDVVERVRLFRAPFAT
SVQRARMLPRAIIGTAIAHIGVGITVLGLSAMSQAQHKIVEVPIGTTEHLAGYDWTLTNVKQEPGPNYTAMMGTLEVRRN
GHLITVMHPSKRSFNTQNQTTTDVAIHTNLLADLYGVLGDKHGPDNNPTYVLRLHYNPLAPWMWLGALVMAFGGALSLSD
RRVRVGAPQRAKSSAEMSAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmF AAN62106.1 putative cytochrome C-type biogenesis protein CcmF Not tested PAGI-2(C) Protein 5e-118 47
ccmF YP_217241.1 cytochrome c-type biogenesis protein Not tested SPI-12 Protein 7e-96 44