Gene Information

Name : M493_07920 (M493_07920)
Accession : REF_PRJNA208285:M493
Strain : Geobacillus sp. JF8
Genome accession: NC_022080
Putative virulence/resistance : Unknown
Product : malate synthase
Function : -
COG functional category : -
COG ID : -
EC number : 2.3.3.9
Position : 1477108 - 1479291 bp
Length : 2184 bp
Strand : +
Note : catalyzes the formation of malate from glyoxylate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GCCGCCGGAAGTGAATGTTTGCAGGCGTGCGCGGCGGTTGGTGGGTCGATCACCGGCGAACATGGCGTTGGCATCGAGAA
AAAAGAAGAGATGCGTTTCATTTTCACCGATGAGGAAATTTTGGCGCAAACGGCGATCCGCGACGTGTTTAATCCGAAAA
ACTTGCTCAACGCCGGCAAGCTGTTTCCGACGCCGGGACGGTGTGTAGAGACAAAACGGACACCGTCGACAGCAAAATGA
AAATTTTACAAAAATGATTGCCAGTCATTTCGTTTCATGGTATGATCTTTTTAGACCATTTAAGAAACAGTGTTTTGTAA
TAAGAAACAAGAAGGGAGAAAGGGAACGATGGCCGAATATGTTCAAACCGGGACGATCCAAGTCGCGAAAGTGTTTTATG
ATTTTGTCAACGGGGAGCTTCTGCCAAACAGCGGGCTTGACCAAGACAAGTTTTGGCGCGATTTTTCCGTGCTTATTGCC
GATTTGACGCCGCGCAACAAAGAGCTGCTGGCGCGCCGCGATGAGATTCAAGAAAAATTGAACGAGTGGCATAAACAGCG
CCGTGGCCGCTTCGATTTTGACGAGTATAAAGCGTTTTTAACGGAAATCGGCTATTTGGAGCCGGAAGTCGAGGACTTCG
AGATTACAACAGAAAATGTCGATGATGAAATTGCCGTGCAGGCCGGGCCGCAGTTGGTCGTGCCGCTCACGAACGCCCGC
TACGCGCTAAACGCCGCCAATGCCCGTTGGGGCAGCTTGTATGACGCGCTGTACGGCACCGATGCCATCAGCGAAGAAGA
CGGTGCCACACGCGGTTCGTCGTACAACCCGGTGCGCGGAGCGAAAGTCATCGCTTACGGGCGGAAGTTTTTGGATGAGG
CGGTGCCGCTTGCCGAATATTCCCATCAAGACGCCGTTCAATACGCGGTCGTTGATGGGCGGCTTGTCGTGACGATCGAA
GGCGGGGCGACAACAGGGCTCAAGGAGCCGGAAAAATTTGTCGGCTTCCAAGGCGAACCGCAAAACCCGGCATCGGTGCT
GTTGAAAAACAATGGCCTTCATATCGACATTCAAATCGACCGCGAGCATCCGGTCGGCAAAACGGACAAAGCGGGTGTGA
AAGACATCATCTTGGAAGCGGCGGTGACGACGATCATGGACGGCGAAGATTCCGTTGCCGCTGTCGACGCGGAAGACAAA
GTGCTCGTCTACCGCAACTTGTTCGGCTTGATCAAAGGCGATTTGACAGCGACGTTTGAGAAAAACGGCAAACTGCTGAC
GCGGGCGTTAAACTCGGATCGCGTATACGAAACGCCGGATGGCGGAAAGCTTGCGCTGCCAGGACGCTCGCTGATGTTTG
TACGCAACGTCGGCCATTTGATGACAAACAGCGCCATTTTGGATGCCAACGGCGAGGAAGTGCATGAAGGGATCATCGAT
GCCGTCATTACGAGTTTGATCATGAAACACTCGCTCATCGGCAATACCCGCTATTTGAACTCGCGCAAAGGTTCGATTTA
TATCGTCAAGCCGAAAATGCACGGCTCGGCCGAAGTGGCCTTTGCCAACGAGCTGTTTGACCGGGTCGAAGATATGCTTG
GCCTTGAGCGGAACACGATCAAAATCGGCGTCATGGACGAAGAGCGGCGGACGTCGCTCAACTTGAAAAATTGTATTTAC
CAAGTGCGCGGCCGCATTGTCTTCATCAACACCGGCTTCCTTGACCGGACGGGTGACGAGATTCATACATCAATGGAAGC
GGGGCCAATGCGGCGCAAAAACGATATGAAATCGTCGGCATGGCTGCAGGCGTACGAAAAATCGAATGTGGCAGTCGGGC
TGGCTGCCGGATTCCGCGGCCGGGCGCAAATCGGCAAAGGGATGTGGGCGATGCCGGATTTGATGGCTGAAATGTTGAAA
CAAAAAGGGGCGCAGCTGAAAGCGGGCGCCAACACGGCATGGGTGCCTTCGCCGACGGCCGCCACGCTCCATGCGCTTCA
TTACCATCAAGTGAATGTCGCTGCCGTGCAAAGCGAATTGGCGAACGAGCGGGCTGATTACCGCGATGACATTTTGCAAA
TTCCGGTTGTCGATCATCCGCAATGGACGGCAGAAGAAATTCAAGAAGAGATTGACAACAACTGCCAAAGCATTTTAGGC
TATGTTGTCCGCTGGGTTGATCAA

Protein sequence :
MAEYVQTGTIQVAKVFYDFVNGELLPNSGLDQDKFWRDFSVLIADLTPRNKELLARRDEIQEKLNEWHKQRRGRFDFDEY
KAFLTEIGYLEPEVEDFEITTENVDDEIAVQAGPQLVVPLTNARYALNAANARWGSLYDALYGTDAISEEDGATRGSSYN
PVRGAKVIAYGRKFLDEAVPLAEYSHQDAVQYAVVDGRLVVTIEGGATTGLKEPEKFVGFQGEPQNPASVLLKNNGLHID
IQIDREHPVGKTDKAGVKDIILEAAVTTIMDGEDSVAAVDAEDKVLVYRNLFGLIKGDLTATFEKNGKLLTRALNSDRVY
ETPDGGKLALPGRSLMFVRNVGHLMTNSAILDANGEEVHEGIIDAVITSLIMKHSLIGNTRYLNSRKGSIYIVKPKMHGS
AEVAFANELFDRVEDMLGLERNTIKIGVMDEERRTSLNLKNCIYQVRGRIVFINTGFLDRTGDEIHTSMEAGPMRRKNDM
KSSAWLQAYEKSNVAVGLAAGFRGRAQIGKGMWAMPDLMAEMLKQKGAQLKAGANTAWVPSPTAATLHALHYHQVNVAAV
QSELANERADYRDDILQIPVVDHPQWTAEEIQEEIDNNCQSILGYVVRWVDQGIGCSKVPDIHNIGLMEDRATLRISSQI
LANWLHHGICTKEQVLEAFKRMAKVVDEQNAGDPNYRPIAPNYDDSVAFQAACDLVFLGYEQPNGYTEPILHRRRQEAKA
KFAAVQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcB CAE85241.1 GlcB protein, malate synthase G Not tested PAI V 536 Protein 0.0 60