Gene Information

Name : OCC_05571 (OCC_05571)
Accession : YP_008429517.1
Strain : Thermococcus litoralis DSM 5473
Genome accession: NC_022084
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1354114 - 1355034 bp
Length : 921 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :
GTGATCGAGAGCTTCAGGGAAGCCTTCGGGAGGGCTTTGGTTGAGCTCGGAAGGGAGAACCCCAATTTAGTAGTCCTCGA
TGCGGACGTCAAGAGCTCGACGAAAACTGCCTACTTCGAGAGGGCCTTTCCCGAGAGGTTCATCCAGGTTGGCATAAGCG
AGCAGGACATGGTCTCGATGGCGGGTGGTCTGGCAATAGCGGGAAAAATCCCCGTTGTTTCGGCCTTTGCGGCTTTCCTG
ATGCGGGCCTGGGAGCAGATAAGGAACACGATAGCCAGGGACAACCTCAACGTCAAGCTCATTCCAACGCACTCGGGCTT
TTCAGACCACATGGATGGTTCATCACACCAGTGCCTTGAGGACATAGCCCTCATGCGCGTCCTCCCGAACATGACGGTCG
TTGTTCCAGCGGATGCCCAGTCAGTTCCAGTCCTCCTCAGGCAGGCAGTCGAGCTTGATGGGCCCGTCTACATGCGCCTC
GGCAGGGACCACGCACCGAGGGTCTACGATAGTCCAAAGCTGGAGCTGGGGAAGGCCAGCGTCCTCAGAAAGGGGAACGA
TGTCCTCCTTGTGGCAGCCGGCGTTATGGTGTCGGTGGCCCTCGAAACGGCCAGGAAACTTGAGGAGAGGGGAATAAGCG
CTGGAGTCGTTGACATGCACACGATAAAGCCCCTCGACGAGGAAACACTGCTGAATCTCGCATCCAAGGTGGAGCTCGTG
GTCACGCTTGAGGAACACAGCATCCACGGCGGCCTCGGAGGAGCGGTAGCTGAGGTTCTCTCGGAAAAGATGCCGAAGAG
GCTCATCAGGATTGGAACAACCGAGTTCGGGAGGTCGAGTAGGGACTACTTCGCACTCCTGGAGCGCTATGGCCTGACGG
CAGAAAGCGTTGTGAGGAAGGTTGAGGTGGTGCTGACATGA

Protein sequence :
MIESFREAFGRALVELGRENPNLVVLDADVKSSTKTAYFERAFPERFIQVGISEQDMVSMAGGLAIAGKIPVVSAFAAFL
MRAWEQIRNTIARDNLNVKLIPTHSGFSDHMDGSSHQCLEDIALMRVLPNMTVVVPADAQSVPVLLRQAVELDGPVYMRL
GRDHAPRVYDSPKLELGKASVLRKGNDVLLVAAGVMVSVALETARKLEERGISAGVVDMHTIKPLDEETLLNLASKVELV
VTLEEHSIHGGLGGAVAEVLSEKMPKRLIRIGTTEFGRSSRDYFALLERYGLTAESVVRKVEVVLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96118.1 transketolase Not tested T-PAI Protein 1e-38 43