Gene Information

Name : OCC_00392 (OCC_00392)
Accession : YP_008428264.1
Strain : Thermococcus litoralis DSM 5473
Genome accession: NC_022084
Putative virulence/resistance : Virulence
Product : pyruvate-formate lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 234449 - 235363 bp
Length : 915 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence :

ATGATGGTCAAGGGTATAATCTTTGACATAAAGCGCTATGCAATCCATGACGGCCCGGGAATCAGAACTACAATCTTTAT
GAAGGGCTGTCCGCTGAGGTGCTGGTGGTGTCACAACCCAGAGGGGATATCCCCAAAGCCGGATATCATGTACTTCAGCT
TTAAGTGCATCCACTGCCACACCTGCGTTAAGGCTTGTCCCGAAAATGCGGTTAGCTTCGATGAAAATGAGATTCAACAT
ATCGATAGAGAAAAGTGCACAGGTTGTGGGATTTGTGCAGAGCTTTGCCCAACGAATGCCCTAAGGCTTGTGGGCAAAGT
TGTTACTGTGGATGAGCTCATTCGCGAGATTGAAAAGGACATTAAGTTCCATGACAGCTCCGATGGGGGAGTAACGTTCT
CTGGTGGAGAACCTCTTTTCCAGCCAGAATTCTTGGAAGATATCCTCAAGGAGTGCAAGAAGAGGTACATTCATACAACA
GTCGATACCTCTGGATACGCCCCAACAAGAATTTTGGAGAAGATACTCTCTTACACAGACCTCTTCCTATATGACCTGAA
ACTTTTTGATGAAAAAGAACACATCAAATATACTGGAGTTCCAAATGAATTGATAAAGAAAAACTTAATTTTCCTTGTTG
AAAAGAAAGCTAACGTAATCCTAAGGTTTCCAGTTATCCCGGGAATAACAGACACAGAATGGAACGTAAAAGGTTGGGCA
AGATTCCTTTCAGAGCTTGACTTAAGTTCTATTCAGGAGATAGATCTGCTGCCATACCATGATGTTGGAGAAAAGTTCAA
CCGCTTGGGAAGGGAATACAAAATGGAAGTTCACCACGCGCCATCTGACGAAACATTAAAATGGATCAAGGAAGAATTTA
AAGGCTTAGGGCTCAAAGTCAAAATCGGTGGGTAG

Protein sequence :

MMVKGIIFDIKRYAIHDGPGIRTTIFMKGCPLRCWWCHNPEGISPKPDIMYFSFKCIHCHTCVKACPENAVSFDENEIQH
IDREKCTGCGICAELCPTNALRLVGKVVTVDELIREIEKDIKFHDSSDGGVTFSGGEPLFQPEFLEDILKECKKRYIHTT
VDTSGYAPTRILEKILSYTDLFLYDLKLFDEKEHIKYTGVPNELIKKNLIFLVEKKANVILRFPVIPGITDTEWNVKGWA
RFLSELDLSSIQEIDLLPYHDVGEKFNRLGREYKMEVHHAPSDETLKWIKEEFKGLGLKVKIGG

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
unnamed	CAD42072.1	hypothetical protein	Not tested	PAI II 536	Protein	9e-46	41

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
OCC_00392	YP_008428264.1	pyruvate-formate lyase	VFG1591	Protein	5e-46	41