Gene Information

Name : LBPG_01562 (LBPG_01562)
Accession : YP_008445382.1
Strain : Lactobacillus paracasei 8700:2
Genome accession: NC_022112
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 23650 - 24351 bp
Length : 702 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATATATCGAAGTCAAACATGAATCAAAACGTTACAAAATGGGCGAAACCATCATTACAGCAAATAACGACATTAA
TTTTACGGCTGATCAAGGCAAATTAACCGTGATTCTTGGTCCCAGCGGTGCCGGTAAATCAACCTTGCTCAATATCCTCG
GTGGCATGGACTCCCCCACTGAAGGCGAGGTATGGATTGACGGCACCGATATTGCGACTTTTTCTGATCGTCAACTGACC
GCTTTTCGCCGGCATAATGTTGGCTTCGTGTTCCAGTTTTACAATCTGATTCCGAACCTGACAACAAGGGAAAATGTTGA
ACTGGCTGGCTCAATTGTCAAAGATGCCTTGGATCCGACAACCGTTTTAAAGCAAGTCGGCCTAGGTGCGCGACTAGATA
ATTTTCCGTCACAGCTGTCTGGCGGTGAGCAACAACGGGTGGCCATTGCTCGGGCGTTGGCGAAAAACCCGAAGCTGCTG
CTTTGTGATGAACCAACTGGTGCCTTGGATTATCGAACCGGCAAACAAGTCTTGCAGTTGTTACAGGATGCCAGTCGTAA
AGATCATAAAACCGTCATGATCATTACCCATAATGCAGCGATTGCCAAAATGGCTGACCGGATCATCGAAATTAATGATG
CGCAGGTTCGCAGTATTCATGATGAACCGCAGCCAACGCCTGTCGCAGACATTGAGTGGTAG

Protein sequence : 
MAYIEVKHESKRYKMGETIITANNDINFTADQGKLTVILGPSGAGKSTLLNILGGMDSPTEGEVWIDGTDIATFSDRQLT
AFRRHNVGFVFQFYNLIPNLTTRENVELAGSIVKDALDPTTVLKQVGLGARLDNFPSQLSGGEQQRVAIARALAKNPKLL
LCDEPTGALDYRTGKQVLQLLQDASRKDHKTVMIITHNAAIAKMADRIIEINDAQVRSIHDEPQPTPVADIEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LBPG_01562 YP_008445382.1 ABC transporter NC_012469.1.7685735. Protein 7e-74 63
LBPG_01562 YP_008445382.1 ABC transporter CP001581.1.gene798.p Protein 2e-42 47
LBPG_01562 YP_008445382.1 ABC transporter NC_012469.1.7686878. Protein 2e-37 42
LBPG_01562 YP_008445382.1 ABC transporter CP001581.1.gene598.p Protein 1e-39 41